Evidence map›Paper›PMID 33990910›Full record

ArticleJournal of microbiology (Seoul, Korea)2021

The inner membrane protein LapB is required for adaptation to cold stress in an LpxC-independent manner.

Han Byeol Lee, Si Hyoung Park, Chang-Ro Lee

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Han Byeol LeeDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea.
Si Hyoung ParkDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea.
Chang-Ro LeeDepartment of Biological Sciences, Myongji University, Yongin, 17058, Republic of Korea. crlee@mju.ac.kr.
Myongji University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inner membrane protein lipopolysaccharide assembly protein B (LapB) is an adaptor protein that activates the proteolysis of LpxC by an essential inner membrane metalloprotease, FtsH, leading to a decrease in the level of lipopolysaccharide in the membrane. In this study, we revealed the mechanism by which the essential inner membrane protein YejM regulates LapB and analyzed the role of the transmembrane domain of LapB in Escherichia coli. The transmembrane domain of YejM genetically and physically interacted with LapB and inhibited its function, which led to the accumulation of LpxC. The transmembrane domain of LapB was indispensable for both its physical interaction with YejM and its regulation of LpxC proteolysis. Notably, we found that the lapB mutant exhibited strong cold sensitivity and this phenotype was not associated with increased accumulation of LpxC. The transmembrane domain of LapB was also required for its role in adaptation to cold stress. Taken together, these results showed that LapB plays an important role in both the regulation of LpxC level, which is controlled by its interaction with the transmembrane domain of YejM, and adaptation to cold stress, which is independent of LpxC.

Indexed as

Adaptation, PhysiologicalCold-Shock ResponseAmidohydrolasesEscherichia coliEscherichia coli ProteinsLipopolysaccharidesMembrane ProteinsMutationProtein DomainsProteolysisAmidohydrolasesEscherichia coli ProteinsLipopolysaccharidesMembrane ProteinsUDP-3-O-acyl-N-acetylglucosamine deacetylaseYciM protein, E coliYejM protein, E colicold stressFtsHLapBlipopolysaccharideLpxCproteaseprotein-protein interactionYejM

Identifiers

PMID33990910
OpenAlexW3163766611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.