Evidence map›Paper›PMID 33988890›Full record

ArticleImmunology and cell biology2021

Human transitional and IgM

Zhiguo Zhang, Christopher J Jara, Mandeep Singh, Huji Xu, Christopher C Goodnow, Katherine Jl Jackson, Joanne H Reed

Abstract read
In one paragraph

Article in Immunology and cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhiguo ZhangGarvan Institute of Medical Research, Sydney, NSW, Australia.ORCID 0000-0002-0810-5320
Christopher J JaraGarvan Institute of Medical Research, Sydney, NSW, Australia.
Mandeep SinghGarvan Institute of Medical Research, Sydney, NSW, Australia.
Huji XuDepartment of Rheumatology and Immunology, Shanghai Changzheng Hospital, Second Military Medical University, Shanghai, China.
Christopher C GoodnowGarvan Institute of Medical Research, Sydney, NSW, Australia.
Katherine Jl JacksonGarvan Institute of Medical Research, Sydney, NSW, Australia.ORCID 0000-0002-9952-7069
Joanne H ReedGarvan Institute of Medical Research, Sydney, NSW, Australia.ORCID 0000-0002-7585-7848

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The level of immunoglobulin M (IgM) displayed on the surface of peripheral blood B cells exhibits a broad dynamic range and has been associated with both development and selection. To determine whether IgM surface expression associates with distinct immunoglobulin heavy-chain (IGH) repertoire properties, we performed deep IgM sequencing of peripheral blood transitional and mature naïve B cells in the upper and lower quartiles of surface IgM expression for 12 healthy donors. Mature naïve B cells within the lowest quartile for surface IgM expression displayed more diverse IGH features including increased complementarity-determining region 3 length, IGHJ6 segment usage and aromatic amino acids compared with mature naïve B cells with high surface IgM. There were no differences between IGH repertoires for transitional B cells with high or low surface IgM. These findings suggest that a selection checkpoint during progression of transitional to mature naïve B cells reduces the breadth of the IGH repertoire among high surface IgM B cells but that diversity is preserved in B cells expressing low levels of surface IgM.

Indexed as

B-LymphocytesImmunoglobulin Heavy ChainsComplementarity Determining RegionsHumansImmunoglobulin MReceptors, Antigen, B-CellComplementarity Determining RegionsImmunoglobulin Heavy ChainsImmunoglobulin MReceptors, Antigen, B-CellantibodiesB-cell receptorB cellsimmune toleranceV(D)J recombination

Identifiers

PMID33988890
PMCPMC8453828

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.