Evidence map›Paper›PMID 33988693›Full record

ArticleInvestigative ophthalmology & visual science2021

Transcriptomic and Immunohistochemical Analysis of Progressive Keratoconus Reveal Altered WNT10A in Epithelium and Bowman's Layer.

James W Foster, Rupin N Parikh, Jiangxia Wang, Kraig S Bower, Mario Matthaei, Shukti Chakravarti, Albert S Jun, Charles G Eberhart, Uri S Soiberman

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Collagen type XII is undetectable in keratoconus Bowman's layer.The British journal of ophthalmology · 2024
    Article
  7. Article
  8. Systemic and Ocular Associations of Keratoconus.Expert review of ophthalmology · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Biochemical and molecular alterations and potential clinical applications of biomarkers in keratoconus.Saudi journal of ophthalmology : official journal of the Saudi Ophthalmological Society
    Article
  15. The fundamentals of WNT10A.Differentiation; research in biological diversity
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

James W FosterThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Rupin N ParikhThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Jiangxia WangThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Kraig S BowerThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Mario MatthaeiDepartment of Ophthalmology, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.
Shukti ChakravartiDepartment of Ophthalmology and Pathology, NYU Langone Health, New York, New York, United States.
Albert S JunThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Charles G EberhartThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Uri S SoibermanThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States.
Johns Hopkins Medicine · USJohns Hopkins University · USNYU Langone Health · USUniversity Hospital Cologne · DE

Funding

Wilmer Core Grant for Vision ResearchP30EY001765 · NEI · JOHNS HOPKINS UNIVERSITY · PI Jiang Qian · 1985 to 2026
$22.1M
The Role of Wnt-regulated Collagen Dysfunction in KeratoconusK08EY027474 · NEI · JOHNS HOPKINS UNIVERSITY · PI SOIBERMAN, URI SIMCHA · 2018 to 2021
$695k
NEI NIH HHS K08 EY027474NEI NIH HHS P30 EY001765
6 · The paper itself

Abstract

Purpose: To identify global gene expression changes in the corneal epithelium of keratoconus (KC) patients compared to non-KC myopic controls. Methods: RNA-sequencing was performed on corneal epithelium samples of five progressive KC and five myopic control patients. Selected results were validated using TaqMan quantitative PCR (qPCR) on 31 additional independent samples, and protein level validation was conducted using western blot analysis on a subset. Immunohistochemistry was performed on tissue microarrays containing cores from over 100 KC and control cases. WNT10A transcript levels in corneal epithelium were correlated with tomographic indicators of KC disease severity in 15 eyes. Additionally, WNT10A was overexpressed in vitro in immortalized corneal epithelial cells. Results: WNT10A was found to be underexpressed in KC epithelium at the transcript (ratio KC/control = 0.59, P = 0.02 per RNA-sequencing study; ratio = 0.66, P = 0.03 per qPCR) and protein (ratio = 0.07, P = 0.06) levels. Immunohistochemical analysis also indicated WNT10A protein was decreased in Bowman's layer of KC patients. In contrast, WNT10A transcript level positively correlated with increased keratometry (Kmax ρ = 0.57, P = 0.02). Finally, WNT10A positively regulated COL1A1 expression in corneal epithelial cells. Conclusions: A specific Wnt ligand, WNT10A, is reduced at the mRNA and protein level in KC epithelium and Bowman's layer. This ligand positively regulates collagen type I expression in corneal epithelial cells. The results suggest that WNT10A expression in the corneal epithelium may play a role in progressive KC.

Indexed as

AdultBlotting, WesternBowman MembraneCollagen Type ICollagen Type I, alpha 1 ChainEpithelium, CornealFemaleGene Expression RegulationHumansImmunohistochemistryKeratoconusMalePhenotypePlasmidsReal-Time Polymerase Chain ReactionRNA, MessengerCollagen Type ICollagen Type I, alpha 1 ChainRNA, MessengerWNT10A protein, humanWnt Proteins

Identifiers

PMID33988693
PMCPMC8132000
OpenAlexW3160384734

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.