Evidence map›Paper›PMID 33988224›Full record

ArticleBioscience reports2021

Targeted next-generation sequencing identifies ABCA4 mutations in Chinese families with childhood-onset and adult-onset Stargardt disease.

Ling-Hui Qu, Xin Jin, Chao Zeng, Nian-Gou Zhou, Yan-Hong Liu, Ye Lin

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural and Pathogenic Impacts ofInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ling-Hui Qu *Department of Ophthalmology, The 74th Army Group Hospital, Guangzhou 510318, China.ORCID 0000-0003-3131-9420
Xin Jin *Department of Ophthalmology, General Hospital of Chinese People's Liberation Army, Beijing 100853, China.
Chao Zeng *Department of Ophthalmology, The 74th Army Group Hospital, Guangzhou 510318, China.
Nian-Gou ZhouDepartment of Ophthalmology, The 74th Army Group Hospital, Guangzhou 510318, China.
Yan-Hong LiuDepartment of Ophthalmology, The 74th Army Group Hospital, Guangzhou 510318, China.
Ye LinDepartment of Ophthalmology, The 74th Army Group Hospital, Guangzhou 510318, China.
Chinese People's Liberation Army · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundStargardt disease (STGD) is the most common form of juvenile macular dystrophy associated with progressive central vision loss, and is agenetically and clinically heterogeneous disease. Molecular diagnosis is of great significance in aiding the clinical diagnosis, helping to determine the phenotypic severity and visual prognosis. In the present study, we determined the clinical and genetic features of seven childhood-onset and three adult-onset Chinese STGD families. We performed capture next-generation sequencing (NGS) of the probands and searched for potentially disease-causing genetic variants in previously identified retinal or macular dystrophy genes.

methodsIn all, ten unrelated Chinese families were enrolled. Panel-based NGS was performed to identify potentially disease-causing genetic variants in previously identified retinal or macular dystrophy genes, including the five known STGD genes (ABCA4, PROM1, PRPH2, VMD2, and ELOVL4). Variant analysis, Sanger validation, and segregation tests were utilized to validate the disease-causing mutations in these families.

resultsUsing systematic data analysis with an established bioinformatics pipeline and segregation analysis, 17 pathogenic mutations in ABCA4 were identified in the 10 STGD families. Four of these mutations were novel: c.371delG, c.681T > G, c.5509C > T, and EX37del. Childhood-onset STGD was associated with severe visual loss, generalized retinal dysfunction and was due to more severe variants in ABCA4 than those found in adult-onset disease.

conclusionsWe expand the existing spectrum of STGD and reveal the genotype-phenotype relationships of the ABCA4 mutations in Chinese patients. Childhood-onset STGD lies at the severe end of the spectrum of ABCA4-associated retinal phenotypes.

Indexed as

DNA Mutational AnalysisHigh-Throughput Nucleotide SequencingMutationAdolescentAdultAge of OnsetAsian PeopleATP-Binding Cassette TransportersCase-Control StudiesChildChinaComputational BiologyFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHeredityABCA4 protein, humanATP-Binding Cassette TransportersABCA4 genechildhood-onsetMutation detectionNext-generation sequencingStargardt disease

Identifiers

PMID33988224
PMCPMC8173525
OpenAlexW3163134664

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.