Evidence map›Paper›PMID 33987663›Full record

ArticleCerebral cortex (New York, N.Y. : 1991)2021

DNA Methylation and Resting Brain Function Mediate the Association between Childhood Urbanicity and Better Speed of Processing.

Weiqiu Cheng, Na Luo, Yuyanan Zhang, Xiao Zhang, Haoyang Tan, Dai Zhang, Jing Sui, Weihua Yue, Hao Yan

Open access · hybridAbstract read
In one paragraph

Article in Cerebral cortex (New York, N.Y. : 1991), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Weiqiu ChengPeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Na LuoBrainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China.
Yuyanan ZhangPeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Xiao ZhangPeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Haoyang TanLieber Institute for Brain Development, Baltimore, MD 21205, USA.
Dai ZhangPeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Jing SuiUniversity of Chinese Academy of Sciences, Beijing 100049, China.
Weihua YuePeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Hao YanPeking University Sixth Hospital/Institute of Mental Health, Beijing 100191, China.
Peking University · CNPeking University Sixth Hospital · CNChinese Academy of Sciences · CNChinese Institute for Brain Research · CNLieber Institute for Brain Development · USUniversity of Chinese Academy of Sciences · CN

Funding

Data-driven approaches to identify biomarkers from multimodal imaging big dataR01MH117107 · NIMH · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D · 2019 to 2022
$1.6M
Chinese Institute for Brain Research at Beijing 2020-NKX-XM-12National Key Research and Development Program of China 2016YFC1307000Natural Science Foundation of China 81771443NIMH NIH HHS R01 MH117107Peking University Clinical Scientist Program BMU2019LCKXJ012Postdoctoral Science Foundation BX20200364
6 · The paper itself

Abstract

Urbanicity has been suggested to affect cognition, but the underlying mechanism remains unknown. We examined whether epigenetic modification (DNA methylation, DNAm), and brain white matter fiber integrity (fractional anisotropy, FA) or local spontaneous brain function activity (regional homogeneity, ReHo) play roles in the association between childhood urbanicity and cognition based on 497 healthy Chinese adults. We found significant correlation between childhood urbanicity and better cognitive performance. Multiset canonical correlation analysis (mCCA) identified an intercorrelated DNAm-FA-ReHo triplet, which showed significant pairwise correlations (DNAm-FA: Bonferroni-adjusted P, Pbon = 4.99E-03, rho = 0.216; DNAm-ReHo: Pbon = 4.08E-03, rho = 0.239; ReHo-FA: Pbon = 1.68E-06, rho = 0.328). Causal mediation analysis revealed that 1) ReHo mediated 10.86% childhood urbanicity effects on the speed of processing and 2) childhood urbanicity alters ReHo through DNA methylation in the cadherin and Wnt signaling pathways (mediated effect: 48.55%). The mediation effect of increased ReHo in the superior temporal gyrus underlying urbanicity impact on a better speed of processing was further validated in an independent cohort. Our work suggests a mediation role for ReHo, particularly increased brain activity in the superior temporal gyrus, in the urbanicity-associated speed of processing.

Indexed as

DNA MethylationUrban PopulationAdolescentAdultAsian PeopleBrainCadherinsCanonical Correlation AnalysisChinaCognitionFemaleHumansMagnetic Resonance ImagingMaleMiddle AgedNeuropsychological TestsCadherinscognitionDNA methylationspontaneous brain activitysuperior temporal gyrusurbanicity

Identifiers

PMID33987663
PMCPMC8408435
OpenAlexW3160413261

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.