Evidence map›Paper›PMID 33987560›Full record

ArticleJournal of animal science and technology2020

Population structure analysis of Yeonsan Ogye using microsatellite markers.

Sung Hyun Cho, Seung-Sook Lee, Prabuddha Manjula, Minjun Kim, Seung Hwan Lee, Jun Heon Lee, Dongwon Seo

Abstract read
In one paragraph

Article in Journal of animal science and technology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. A retroviral insertion in the tyrosinase (Journal of animal science and technology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sung Hyun ChoDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0002-2657-9159
Seung-Sook LeeJisan Farm, Nonsan 29009, Korea.ORCID https://orcid.org/0000-0002-1898-5448
Prabuddha ManjulaDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0001-8074-8323
Minjun KimDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0002-8173-8431
Seung Hwan LeeDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0003-1508-4887
Jun Heon LeeDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0003-3996-9209
Dongwon SeoDivision of Animal and Dairy Science, Chungnam National University, Daejeon 34134, Korea.ORCID https://orcid.org/0000-0003-0548-7068

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Yeonsan Ogye (YO) chicken is a natural heritage of Korea, characterized by black feathers, skin, bones, eyes, and comb. The purebred of YO population has been reared under the natural mating system with no systematic selection and breeding plan. The purpose of this study was to identify the genetic diversity and find the optimal number of population sub-division using 12 polymorphic microsatellite (MS) markers to construct a pedigree-based breeding plan for the YO population. A total of 509 YO birds were used for this study. Genetic diversity and population structure analysis were conducted based on the MS marker genotype information. The overall average polymorphic information content value and expected heterozygosity of the population were 0.586, and 0.642, respectively. The K-mean cluster analysis based on the genetic distance result confirmed that the current YO population can be divided into three ancestry groups. Individuals in each group were evaluated based on their genetic distance to identify the potential candidates for a future breeding plan. This study concludes that a future breeding plan with known pedigree information of selected founder animals, which holds high genetic diversity, could be the best strategy to ensure the conservation of the Korean YO chicken population.

Indexed as

Genetic diversity studyK-mean clusteringMicrosatellite markerYeonsan Ogye chicken

Identifiers

PMID33987560
PMCPMC7721577

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.