Evidence map›Paper›PMID 33983932›Full record

ArticlePLoS genetics2021

RNA editing at a limited number of sites is sufficient to prevent MDA5 activation in the mouse brain.

Jung In Kim, Taisuke Nakahama, Ryuichiro Yamasaki, Pedro Henrique Costa Cruz, Tuangtong Vongpipatana, Maal Inoue, Nao Kanou, Yanfang Xing, Hiroyuki Todo, Toshiharu Shibuya and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
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  11. HeterozygousiScience · 2026
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  12. Review
  13. Review
  14. Article
  15. Mouse models of type I interferonopathies.Human molecular genetics · 2025
    Review
  16. Review
  17. Emerging clinical applications of ADAR based RNA editing.Stem cells translational medicine · 2025
    Review
  18. Review
  19. The role of ADAR1 in human pathophysiology.Frontiers in cell and developmental biology · 2025
    Review
  20. ADAR1: from basic mechanisms to inhibitors.Trends in cell biology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Jung In KimDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.ORCID 0000-0003-0044-240X
Taisuke NakahamaDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Ryuichiro YamasakiDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Pedro Henrique Costa CruzDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Tuangtong VongpipatanaDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Maal InoueDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.ORCID 0000-0003-1142-1516
Nao KanouDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Yanfang XingDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Hiroyuki TodoDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.
Toshiharu ShibuyaDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.ORCID 0000-0002-9118-9413
Yuki KatoDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.ORCID 0000-0002-1526-2754
Yukio KawaharaDepartment of RNA Biology and Neuroscience, Graduate School of Medicine, Osaka University, Suita, Japan.ORCID 0000-0002-2629-9405
The University of Osaka · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenosine deaminase acting on RNA 1 (ADAR1), an enzyme responsible for adenosine-to-inosine RNA editing, is composed of two isoforms: nuclear p110 and cytoplasmic p150. Deletion of Adar1 or Adar1 p150 genes in mice results in embryonic lethality with overexpression of interferon-stimulating genes (ISGs), caused by the aberrant recognition of unedited endogenous transcripts by melanoma differentiation-associated protein 5 (MDA5). However, among numerous RNA editing sites, how many RNA sites require editing, especially by ADAR1 p150, to avoid MDA5 activation and whether ADAR1 p110 contributes to this function remains elusive. In particular, ADAR1 p110 is abundant in the mouse brain where a subtle amount of ADAR1 p150 is expressed, whereas ADAR1 mutations cause Aicardi-Goutières syndrome, in which the brain is one of the most affected organs accompanied by the elevated expression of ISGs. Therefore, understanding RNA editing-mediated prevention of MDA5 activation in the brain is especially important. Here, we established Adar1 p110-specific knockout mice, in which the upregulated expression of ISGs was not observed. This result suggests that ADAR1 p150-mediated RNA editing is enough to suppress MDA5 activation. Therefore, we further created Adar1 p110/Adar2 double knockout mice to identify ADAR1 p150-mediated editing sites. This analysis demonstrated that although the elevated expression of ISGs was not observed, only less than 2% of editing sites were preserved in the brains of Adar1 p110/Adar2 double knockout mice. Of note, we found that some sites were highly edited, which was comparable to those found in wild-type mice, indicating the presence of ADAR1 p150-specific sites. These data suggest that RNA editing at a very limited sites, which is mediated by a subtle amount of ADAR1 p150, is sufficient to prevents MDA5 activation, at least in the mouse brain.

Indexed as

RNA Editing3' Untranslated RegionsAdenosine DeaminaseAnimalsAnimals, NewbornBrainFemaleInterferon-Induced Helicase, IFIH1IntronsIsoenzymesMiceMice, KnockoutMutationOrgan SpecificityRNA-Binding ProteinsSurvival Rate3' Untranslated RegionsADAR1 protein, mouseADAR2 protein, mouseAdenosine DeaminaseIfih1 protein, mouseInterferon-Induced Helicase, IFIH1IsoenzymesRNA-Binding Proteins

Identifiers

PMID33983932
PMCPMC8118328
OpenAlexW3161427556

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.