Evidence map›Paper›PMID 33983923›Full record

ArticlePLoS genetics2021

3D facial phenotyping by biometric sibling matching used in contemporary genomic methodologies.

Hanne Hoskens, Dongjing Liu, Sahin Naqvi, Myoung Keun Lee, Ryan J Eller, Karlijne Indencleef, Julie D White, Jiarui Li, Maarten H D Larmuseau, Greet Hens and 8 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  15. Effect of genetic variants inForensic sciences research · 2023
    Article
  16. Review
  17. Article
  18. Article
  19. Frontiers in genetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 4 countries.

Hanne HoskensDepartment of Human Genetics, KU Leuven, Leuven, Belgium.ORCID 0000-0002-1467-6461
Dongjing LiuDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0002-9520-7789
Sahin NaqviDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California, United States of America.ORCID 0000-0003-2635-7967
Myoung Keun LeeDepartment of Oral Biology, Center for Craniofacial and Dental Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0003-1508-9661
Ryan J EllerDepartment of Biology, Indiana University Purdue University Indianapolis, Indianapolis, Indiana, United States of America.ORCID 0000-0002-5632-2792
Karlijne IndencleefMedical Imaging Research Center, UZ Leuven, Leuven, Belgium.ORCID 0000-0003-2318-1636
Julie D WhiteDepartment of Anthropology, The Pennsylvania State University, State College, Pennsylvania, United States of America.ORCID 0000-0002-2235-4817
Jiarui LiMedical Imaging Research Center, UZ Leuven, Leuven, Belgium.ORCID 0000-0003-0581-5850
Maarten H D LarmuseauDepartment of Human Genetics, KU Leuven, Leuven, Belgium.ORCID 0000-0002-5974-7235
Greet HensDepartment of Otorhinolaryngology, KU Leuven, Leuven, Belgium.
Joanna WysockaDepartment of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Susan WalshDepartment of Biology, Indiana University Purdue University Indianapolis, Indianapolis, Indiana, United States of America.ORCID 0000-0002-7064-1589
Stephen RichmondApplied Clinical Research and Public Health, School of Dentistry, Cardiff University, Cardiff, United Kingdom.ORCID 0000-0001-5449-5318
Mark D ShriverDepartment of Anthropology, The Pennsylvania State University, State College, Pennsylvania, United States of America.ORCID 0000-0003-0006-0479
John R ShafferDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0003-1897-1131
Hilde PeetersDepartment of Human Genetics, KU Leuven, Leuven, Belgium.ORCID 0000-0002-7295-3375
Seth M WeinbergDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.ORCID 0000-0001-9467-4556
Peter ClaesDepartment of Human Genetics, KU Leuven, Leuven, Belgium.ORCID 0000-0001-9489-9819
Universitair Ziekenhuis Leuven · BEUniversity of Pittsburgh · USKU Leuven · BEPennsylvania State University · USUniversity of Indianapolis · USCardiff University · GBHoward Hughes Medical Institute · USRode Kruis-Vlaanderen · BEStanford University · US

Funding

Extending the Phenotype of Nonsyndromic Orofacial CleftsR01DE016148 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2004 to 2018
$19.7M
The Genetic Architecture of Human Facial MorphologyR01DE027023 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLAES, PETER, SHAFFER, JOHN R · 2017 to 2024
$5.2M
Epigenetic landscapes and regulatory divergence of human craniofacial traitsU01DE024430 · NIDCR · STANFORD UNIVERSITY · PI SELLERI, LICIA, WYSOCKA, JOANNA · 2014 to 2018
$3.1M
3D Analysis of Normal Facial Variation: Data Repository and Genetics (Research)U01DE020078 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2009 to 2013
$2.0M
Howard Hughes Medical InstituteMedical Research Council G9815508Medical Research Council MC_PC_15018Medical Research Council MC_PC_19009NHLBI NIH HHS HHSN268201200008CNHLBI NIH HHS HHSN268201200008INIDCR NIH HHS R01 DE016148NIDCR NIH HHS R01 DE027023NIDCR NIH HHS U01 DE020078NIDCR NIH HHS U01 DE024430Wellcome TrustWellcome Trust 102215/2/13/2
6 · The paper itself

Abstract

The analysis of contemporary genomic data typically operates on one-dimensional phenotypic measurements (e.g. standing height). Here we report on a data-driven, family-informed strategy to facial phenotyping that searches for biologically relevant traits and reduces multivariate 3D facial shape variability into amendable univariate measurements, while preserving its structurally complex nature. We performed a biometric identification of siblings in a sample of 424 children, defining 1,048 sib-shared facial traits. Subsequent quantification and analyses in an independent European cohort (n = 8,246) demonstrated significant heritability for a subset of traits (0.17-0.53) and highlighted 218 genome-wide significant loci (38 also study-wide) associated with facial variation shared by siblings. These loci showed preferential enrichment for active chromatin marks in cranial neural crest cells and embryonic craniofacial tissues and several regions harbor putative craniofacial genes, thereby enhancing our knowledge on the genetic architecture of normal-range facial variation.

Indexed as

Biometric IdentificationGenomicsImaging, Three-DimensionalPhenotypeSiblingsAdolescentChildChild, PreschoolCraniofacial AbnormalitiesDatasets as TopicEuropeFaceFemaleGenetic Association StudiesHumansMale

Identifiers

PMID33983923
PMCPMC8118281
OpenAlexW3163578704

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.