Evidence map›Paper›PMID 33983674›Full record

ArticleMolecular oncology2021

A DNA damage repair gene-associated signature predicts responses of patients with advanced soft-tissue sarcoma to treatment with trabectedin.

David S Moura, Maria Peña-Chilet, Juan Antonio Cordero Varela, Ramiro Alvarez-Alegret, Carolina Agra-Pujol, Francisco Izquierdo, Rafael Ramos, Luis Ortega-Medina, Francisco Martin-Davila, Carolina Castilla-Ramirez and 20 more

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 20 institutions in 1 country.

David S MouraInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Maria Peña-ChiletInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Juan Antonio Cordero VarelaInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Ramiro Alvarez-AlegretPathology Department, Miguel Servet University Hospital, Zaragoza, Spain.
Carolina Agra-PujolPathology Department, Gregorio Marañon University Hospital, Madrid, Spain.
Francisco IzquierdoPathological Anatomy Service, Complejo Asistencial Universitario de León, Spain.
Rafael RamosPathology Department, Son Espases University Hospital, Mallorca, Spain.
Luis Ortega-MedinaPathology Department, Hospital Clinico San Carlos, Madrid, Spain.
Francisco Martin-DavilaPathology Department, Ciudad Real General Hospital, Spain.
Carolina Castilla-RamirezPathology Department, University Hospital Virgen del Rocio, Seville, Spain.
Carmen Nieves Hernandez-LeonPathology Department, Canarias University Hospital, Santa Cruz de Tenerife, Spain.
Cleofe RomagosaPathology Department, Vall d'Hebron University Hospital, Barcelona, Spain.
Maria Angeles Vaz SalgadoMedical Oncology Department, Ramon y Cajal University Hospital, Madrid, Spain.
Javier LaverniaMedical Oncology Department, Instituto Valenciano de Oncologia, Valencia, Spain.
Silvia BaguéPathology Service, Hospital de la Santa Creu i Sant Pau, Barcelona, Spain.
Empar Mayodormo-ArandaPathology Department, Hospital Universitari i Politècnic la Fe, Valencia, Spain.
Luis ViciosoPathology Department, Virgen de la Victoria University Hospital, Malaga, Spain.
Jose Emilio Hernández BarcelóPathology Department, Virgen de la Arrixaca University Hospital, Murcia, Spain.
Jordi Rubio-CasadevallMedical Oncology Department, Hospital Josep Trueta, Catalan Institute of Oncology, Girona, Spain.
Ana de JuanMedical Oncology Department, Marqués de Valdecilla University Hospital, Santander, Spain.
Maria Concepcion Fiaño-ValverdeDepartment of Histopathology, Álvaro Cunqueiro Hospital, University Hospital Complex of Vigo, Spain.
Nadia HindiInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Maria Lopez-AlvarezInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Serena LacerenzaInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Joaquin DopazoInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.
Antonio GutierrezHematology Department, Son Espases University Hospital, Mallorca, Spain.
Rosa AlvarezMedical Oncology Department, Gregorio Marañon University Hospital, Madrid, Spain.ORCID 0000-0003-0935-8298
Claudia ValverdeMedical Oncology Department, Vall d'Hebron University Hospital, Barcelona, Spain.
Javier Martinez-TruferoMedical Oncology Department, Miguel Servet University Hospital, Zaragoza, Spain.ORCID 0000-0002-0997-2573
Javier Martín-BrotoInstitute of Biomedicine of Seville (IBIS, HUVR, CSIC, Universidad de Sevilla), Spain.ORCID 0000-0001-7350-6916
Instituto de Biomedicina de Sevilla · ESFundación Progreso y Salud · ESHospital General Universitario Gregorio Marañón · ESHospital Universitario Fundación Jiménez Díaz · ESHospital Universitario Miguel Servet · ESHospital Universitario Son Espases · ESVall d'Hebron Hospital Universitari · ESComplejo Asistencial Universitario de Palencia · ESFundación Instituto Valenciano de Oncología · ESHospital Clínico San Carlos · ESHospital Clínico Universitario Virgen de la Victoria · ESHospital de Sant Pau · ESHospital General Universitario de Ciudad Real · ESHospital Universitari i Politècnic La Fe · ESHospital Universitario de Canarias · ESHospital Universitario Virgen de la Arrixaca · ESHospital Universitario Virgen del Rocío · ESInstitut Català d'Oncologia · ESInstituto Cajal · ESMarqués de Valdecilla University Hospital · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Predictive biomarkers of trabectedin represent an unmet need in advanced soft-tissue sarcomas (STS). DNA damage repair (DDR) genes, involved in homologous recombination or nucleotide excision repair, had been previously described as biomarkers of trabectedin resistance or sensitivity, respectively. The majority of these studies only focused on specific factors (ERCC1, ERCC5, and BRCA1) and did not evaluate several other DDR-related genes that could have a relevant role for trabectedin efficacy. In this retrospective translational study, 118 genes involved in DDR were evaluated to determine, by transcriptomics, a predictive gene signature of trabectedin efficacy. A six-gene predictive signature of trabectedin efficacy was built in a series of 139 tumor samples from patients with advanced STS. Patients in the high-risk gene signature group showed a significantly worse progression-free survival compared with patients in the low-risk group (2.1 vs 6.0 months, respectively). Differential gene expression analysis defined new potential predictive biomarkers of trabectedin sensitivity (PARP3 and CCNH) or resistance (DNAJB11 and PARP1). Our study identified a new gene signature that significantly predicts patients with higher probability to respond to treatment with trabectedin. Targeting some genes of this signature emerges as a potential strategy to enhance trabectedin efficacy.

Indexed as

SarcomaTetrahydroisoquinolinesAntineoplastic Agents, AlkylatingDioxolesDNA DamageDNA RepairHumansRetrospective StudiesTrabectedinAntineoplastic Agents, AlkylatingDioxolesTetrahydroisoquinolinesTrabectedingene signaturepredictive biomarkerstrabectedin

Identifiers

PMID33983674
PMCPMC8637557
OpenAlexW3160062474

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.