Evidence map›Paper›PMID 33980678›Full record

ArticlemSphere2021

Microbiome Analysis Reveals Diversity and Function of

Zachary T Pimentel, Keith Dufault-Thompson, Kayla T Russo, Abigail K Scro, Roxanna M Smolowitz, Marta Gomez-Chiarri, Ying Zhang

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

  1. Effects of aquaculture practices onApplied and environmental microbiology · 2026
    Article
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  4. Review
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  7. Article
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  10. Cross-talk and mutual shaping between the immune system and the microbiota during an oyster's life.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. AMicrobiology resource announcements · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zachary T PimentelDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.
Keith Dufault-ThompsonDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.
Kayla T RussoDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.
Abigail K ScroAquatic Diagnostic Laboratory, Roger Williams University, Bristol, Rhode Island, USA.
Roxanna M SmolowitzAquatic Diagnostic Laboratory, Roger Williams University, Bristol, Rhode Island, USA.
Marta Gomez-ChiarriDepartment of Fisheries, Animal and Veterinary Science, University of Rhode Island, Kingston, Rhode Island, USA.
Ying ZhangDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA yingzhang@uri.edu.ORCID 0000-0001-8759-0194
University of Rhode Island · USRoger Williams University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine invertebrate microbiomes play important roles in diverse host and ecological processes. However, a mechanistic understanding of host-microbe interactions is currently available for a small number of model organisms. Here, an integrated taxonomic and functional analysis of the microbiome of the eastern oyster,

Indexed as

MetagenomeAnimalsBacteriaCrassostreaGastrointestinal MicrobiomeMetagenomicsPhylogenyRNA, Ribosomal, 16STenericutesRNA, Ribosomal, 16SChlamydiaeeastern oystermetagenomicsmicrobiomeMollicutesSpirochaetia

Identifiers

PMID33980678
PMCPMC8125052
OpenAlexW3163284601

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.