Evidence map›Paper›PMID 33979606›Full record

ArticleCell reports2021

A high-throughput genome-wide RNAi screen identifies modifiers of survival motor neuron protein.

Nikki M McCormack, Mahlet B Abera, Eveline S Arnold, Rebecca M Gibbs, Scott E Martin, Eugen Buehler, Yu-Chi Chen, Lu Chen, Kenneth H Fischbeck, Barrington G Burnett

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Patient-specific responses toMolecular therapy. Methods & clinical development · 2024
    Article
  6. Article
  7. In Search of Spinal Muscular Atrophy Disease Modifiers.International journal of molecular sciences · 2024
    Review
  8. Review
  9. Mitochondrial Dysfunction in Spinal Muscular Atrophy.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Spinal muscular atrophy.Nature reviews. Disease primers · 2022
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Nikki M McCormackDepartment of Anatomy, Physiology and Genetics, Uniformed Services University of the Health Sciences, F. Edward Hébert School of Medicine, Bethesda, MD 20814, USA.
Mahlet B AberaDepartment of Anatomy, Physiology and Genetics, Uniformed Services University of the Health Sciences, F. Edward Hébert School of Medicine, Bethesda, MD 20814, USA.
Eveline S ArnoldNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, Bethesda, MD 20892, USA.
Rebecca M GibbsNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, Bethesda, MD 20892, USA.
Scott E MartinFunctional Genomics Lab, National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD 20850, USA.
Eugen BuehlerFunctional Genomics Lab, National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD 20850, USA.
Yu-Chi ChenFunctional Genomics Lab, National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD 20850, USA.
Lu ChenFunctional Genomics Lab, National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD 20850, USA.
Kenneth H FischbeckNeurogenetics Branch, National Institute of Neurological Disorders and Stroke, Bethesda, MD 20892, USA.
Barrington G BurnettDepartment of Anatomy, Physiology and Genetics, Uniformed Services University of the Health Sciences, F. Edward Hébert School of Medicine, Bethesda, MD 20814, USA. Electronic address: barrington.burnett@usuhs.edu.
National Institute of Neurological Disorders and Stroke · USNational Institutes of Health · USUniformed Services University of the Health Sciences · USNational Center for Advancing Translational Sciences · US

Funding

Studies of Hereditary Neurological Disease: Disease MechanismsZIANS003038 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI FISCHBECK, KENNETH · 2009 to 2023
$19.5M
Trans-NIH RNAi Facility (TNRF)ZICTR000041 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI CHENG, KEN · 2015 to 2025
$9.4M
Calcium Dysregulation and Cell Function in Spinal Muscular AtrophyR01NS119594 · NINDS · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI BURNETT, BARRINGTON G, FLAGG, THOMAS · 2021 to 2025
$2.0M
Targeting the Ubiquitin Proteasome System to Treat Spinal Muscular AtrophyR01NS091575 · NINDS · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI BURNETT, BARRINGTON G · 2016 to 2020
$1.5M
NINDS NIH HHS R01 NS091575NINDS NIH HHS R01 NS119594
6 · The paper itself

Abstract

Spinal muscular atrophy (SMA) is a debilitating neurological disorder marked by degeneration of spinal motor neurons and muscle atrophy. SMA results from mutations in survival motor neuron 1 (SMN1), leading to deficiency of survival motor neuron (SMN) protein. Current therapies increase SMN protein and improve patient survival but have variable improvements in motor function, making it necessary to identify complementary strategies to further improve disease outcomes. Here, we perform a genome-wide RNAi screen using a luciferase-based activity reporter and identify genes involved in regulating SMN gene expression, RNA processing, and protein stability. We show that reduced expression of Transcription Export complex components increases SMN levels through the regulation of nuclear/cytoplasmic RNA transport. We also show that the E3 ligase, Neurl2, works cooperatively with Mib1 to ubiquitinate and promote SMN degradation. Together, our screen uncovers pathways through which SMN expression is regulated, potentially revealing additional strategies to treat SMA.

Indexed as

Genetic TechniquesGenomicsHigh-Throughput Screening AssaysHumansMotor NeuronsRNA InterferenceE3 ligaseRNAi screenspinal muscular atrophysurvival motor neuronTHOCubiquitin proteasome

Identifiers

PMID33979606
PMCPMC8679797
OpenAlexW3162844635

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.