Evidence map›Paper›PMID 33979483›Full record

ArticleAngewandte Chemie (International ed. in English)2021

Direct Immunodetection of Global A-to-I RNA Editing Activity with a Chemiluminescent Bioassay.

Steve D Knutson, Robert A Arthur, H Richard Johnston, Jennifer M Heemstra

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Steve D KnutsonDepartment of Chemistry, Emory University, 1515 Dickey Dr., Atlanta, GA, 30322, USA.ORCID 0000-0001-6822-464X
Robert A ArthurEmory Integrated Computational Core, Emory University, 101 Woodruff Cir., Atlanta, GA, 30322, USA.
H Richard JohnstonEmory Integrated Computational Core, Emory University, 101 Woodruff Cir., Atlanta, GA, 30322, USA.
Jennifer M HeemstraDepartment of Chemistry, Emory University, 1515 Dickey Dr., Atlanta, GA, 30322, USA.ORCID 0000-0002-7691-8526
Emory University · US

Funding

Proteomics CoreU54DK110858 · NIDDK · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Anna E Beaudin, JAMES Eric COX · 2016 to 2026
$8.6M
Repurposing Endonuclease V for the detection and engineering of adenosine-to-inosine editingR01GM140657 · NIGMS · WASHINGTON UNIVERSITY · PI HEEMSTRA, JENNIFER MARGARET · 2021 to 2022
$622k
Single-cell quantification of A-to-I RNA editing using multi-sequence capture beadsR21GM134564 · NIGMS · EMORY UNIVERSITY · PI HEEMSTRA, JENNIFER MARGARET, PHILLIPS, JOHN DEARBORN · 2020 to 2021
$438k
NIDDK NIH HHS U54 DK110858NIGMS NIH HHS R01 GM140657NIGMS NIH HHS R01GM140657NIGMS NIH HHS R21 GM134564
6 · The paper itself

Abstract

Adenosine-to-inosine (A-to-I) editing is a conserved eukaryotic RNA modification that contributes to development, immune response, and overall cellular function. Here, we utilize Endonuclease V (EndoV), which binds specifically to inosine in RNA, to develop an EndoV-linked immunosorbency assay (EndoVLISA) as a rapid, plate-based chemiluminescent method for measuring global A-to-I editing signatures in cellular RNA. We first optimize and validate our assay with chemically synthesized oligonucleotides. We then demonstrate rapid detection of inosine content in treated cell lines, demonstrating equivalent performance against current standard RNA-seq approaches. Lastly, we deploy our EndoVLISA for profiling differential A-to-I RNA editing signatures in normal and diseased human tissue, illustrating the utility of our platform as a diagnostic bioassay. Together, the EndoVLISA method is cost-effective, straightforward, and utilizes common laboratory equipment, offering a highly accessible new approach for studying A-to-I editing. Moreover, the multi-well plate format makes this the first assay amenable for direct high-throughput quantification of A-to-I editing for applications in disease detection and drug development.

Indexed as

Luminescent MeasurementsAdenosineHumansInosineRNARNA EditingAdenosineInosineRNAadenosine-to-inosine editingbioorganic chemistrychemiluminescenceimmunoassaysRNA

Identifiers

PMID33979483
PMCPMC8562906
OpenAlexW3162572646

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.