Evidence map›Paper›PMID 33979209›Full record

ArticleMolecular biology of the cell2021

Truncation of the otoferlin transmembrane domain alters the development of hair cells and reduces membrane docking.

Aayushi Manchanda, Josephine A Bonventre, Sean M Bugel, Paroma Chatterjee, Robyn Tanguay, Colin P Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology of the cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Otoferlin as a multirole CaFrontiers in cellular neuroscience · 2023
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Aayushi ManchandaMolecular and Cellular Biology Program, Oregon State University, Corvallis, OR 97333.
Josephine A BonventreDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97333.
Sean M BugelDepartment of Environmental and Molecular Toxicology, Oregon State University, Corvallis, OR 97333.
Paroma ChatterjeeMolecular and Cellular Biology Program, Oregon State University, Corvallis, OR 97333.
Robyn TanguayDepartment of Environmental and Molecular Toxicology, Oregon State University, Corvallis, OR 97333.
Colin P JohnsonMolecular and Cellular Biology Program, Oregon State University, Corvallis, OR 97333.
Oregon State University · US

Funding

In vivo and in vitro studies of the deafness associated protein otoferlinR01DC014588 · NIDCD · OREGON STATE UNIVERSITY · PI JOHNSON, COLIN P · 2016 to 2020
$1.7M
NIDCD NIH HHS R01 DC014588
6 · The paper itself

Abstract

Release of neurotransmitter from sensory hair cells is regulated by otoferlin. Despite the importance of otoferlin in the auditory and vestibular pathways, the functional contributions of the domains of the protein have not been fully characterized. Using a zebrafish model, we investigated a mutant otoferlin with a stop codon at the start of the transmembrane domain. We found that both the phenotype severity and the expression level of mutant otoferlin changed with the age of the zebrafish. At the early developmental time point of 72 h post fertilization, low expression of the otoferlin mutant coincided with synaptic ribbon deficiencies, reduced endocytosis, and abnormal transcription of several hair cell genes. As development proceeded, expression of the mutant otoferlin increased, and both synaptic ribbons and hair cell transcript levels resembled wild type. However, hair cell endocytosis deficits and abnormalities in the expression of GABA receptors persisted even after up-regulation of mutant otoferlin. Analysis of membrane-reconstituted otoferlin measurements suggests a function for the transmembrane domain in liposome docking. We conclude that deletion of the transmembrane domain reduces membrane docking, attenuates endocytosis, and results in developmental delay of the hair cell.

Indexed as

Age FactorsAnimalsEndocytosisExocytosisGene ExpressionHair Cells, AuditoryHumansMembrane ProteinsProtein DomainsSynapsesZebrafishMembrane ProteinsOTOF protein, human

Identifiers

PMID33979209
PMCPMC8351550
OpenAlexW3163011035

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.