Evidence map›Paper›PMID 33978714›Full record

ArticleAnnals of botany2021

Redox-related gene expression and sugar accumulation patterns are altered in the edible inflorescence produced by the cultivated form of pacaya palm (Chamaedorea tepejilote).

Hanene Hosni, Abdoulaye Diallo, Fabienne Morcillo, Virginie Vaissayre, Myriam Collin, Christine Tranchant-Dubreuil, Stéphane Dussert, Thierry Joët, Felipe Castaño, Xavier Marquínez and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 5 countries.

Hanene HosniInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Abdoulaye DialloInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Fabienne MorcilloCIRAD, DIADE, Montpellier, France.
Virginie VaissayreInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Myriam CollinInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Christine Tranchant-DubreuilInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Stéphane DussertInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Thierry JoëtInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.ORCID 0000-0002-0531-5146
Felipe CastañoUniversidad Industrial de Santander, Escuela de Biología, Calle, Bucaramanga, Colombia.
Xavier MarquínezUniversidad Nacional de Colombia, Departamento de Biología, Carrera, Bogotá, Colombia.
Fred W StaufferConservatoire et Jardin botaniques de la Ville de Genève, Université de Genève, Laboratoire de Systématique Végétale et Biodiversité, Chambésy, Switzerland.
Donald R HodelUniversity of California, Cooperative Extension, Alhambra, CA, USA.
Juan Jose Castillo MontFacultad de Agronomia, Universidad de San Carlos de Guatemala, Guatemala City, Guatemala.
Hélène AdamInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.ORCID 0000-0003-0324-6201
Stefan JouannicInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
James W TregearInstitut de Recherche pour le Développement (IRD), UMR DIADE, Université de Montpellier, Montpellier, France.
Université de Montpellier · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRIndustrial University of Santander · CONapa Valley College · USUniversidad de San Carlos de Guatemala · GTUniversidad Nacional de Colombia · COUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsThe pacaya palm is a dioecious neotropical palm species that is exploited in Latin America for its male inflorescence, which is edible when immature. It is cultivated, in a non-intensive manner, in Guatemala, where a morphotype occurs that produces much larger, more highly branched inflorescences compared with wild palms. We sought to identify molecular factors underlying this phenotypic divergence, which is likely to be a product of domestication.

methodsWe performed RNA-seq-based studies on immature pacaya palm male inflorescences in order to identify genes that might be directly or indirectly affected in their expression in relation to domestication. We also measured the accumulation of a range of soluble sugar molecules to provide information on the biochemical status of the two different types of material. KEY

resultsA total of 408 genes were found to display significantly different expression levels between the wild and cultivated morphotypes. Three different functional categories were found to be enriched in the gene set that was upregulated in the cultivated morphotype: redox balance; secondary metabolism; and transport. Several sugars were found to accumulate at higher levels in inflorescences of the cultivated morphotype, in particular myo-inositol, fructose and glucose.

conclusionsThe observed upregulation of redox-related genes in the cultivated morphotype is corroborated by the observation of higher myo-inositol accumulation, which has been shown to be associated with enhanced scavenging of reactive oxygen species in other plants and which may affect meristem activity.

Indexed as

ArecaceaeInflorescenceGene ExpressionOxidation-ReductionSugarsSugarsArecaceaebranchingChamaedorea tepejilotedomesticationInflorescencepacayaredoxsugar

Identifiers

PMID33978714
PMCPMC8324030
OpenAlexW3163350260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.