Evidence map›Paper›PMID 33976164›Full record

ArticleNature communications2021

Immune evolution from preneoplasia to invasive lung adenocarcinomas and underlying molecular features.

Hitoshi Dejima, Xin Hu, Runzhe Chen, Jiexin Zhang, Junya Fujimoto, Edwin R Parra, Cara Haymaker, Shawna M Hubert, Dzifa Duose, Luisa M Solis and 28 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 137 citations in OpenAlex.

  1. Review
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  3. Obesity Promotes Lung Carcinogenesis Through Airway Immune Dysfunction.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
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  13. Signaling pathways and targeted interventions for precancers.Signal transduction and targeted therapy · 2026
    Review
  14. Article
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  17. Review
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  19. Article
  20. Article

47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 6 institutions in 4 countries.

Hitoshi Dejima *Department of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Xin Hu *Department of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Runzhe Chen *Department of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Jiexin Zhang *Department of Bioinformatics & Computational Biology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-9526-6730
Junya Fujimoto *Department of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Edwin R ParraDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-9068-1636
Cara HaymakerDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-1317-9287
Shawna M HubertDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-7907-9609
Dzifa DuoseDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Luisa M SolisDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-1253-630X
Dan SuInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, China.ORCID 0000-0002-8423-1994
Junya FukuokaDepartment of Pathology, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Kazuhiro TabataDepartment of Pathology, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan.
Hoa H N PhamDepartment of Pathology, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Japan.ORCID 0000-0002-0998-4486
Nicholas McgranahanCancer Research United Kingdom-University College London Lung Cancer Centre of Excellence, London, UK.
Baili ZhangDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Jie YeDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Lisha YingInstitute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, China.
Latasha LittleDepartment of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Curtis GumbsDepartment of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Chi-Wan ChowDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Marcos Roberto EstecioDepartment of Epigenetics and Molecular Carcinogenesis, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Myrna C B GodoyDepartment of Thoracic Imaging, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Mara B AntonoffDepartment of Thoracic and Cardiovascular Surgery, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-6247-9537
Boris SepesiDepartment of Thoracic and Cardiovascular Surgery, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Harvey I PassDepartment of Cardiothoracic Surgery, New York University Langone Medical Center, New York, NY, USA.
Carmen BehrensDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Jianhua ZhangDepartment of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-5412-9860
Ara A VaporciyanDepartment of Thoracic and Cardiovascular Surgery, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
John V HeymachDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-9068-8942
Paul ScheetDepartment of Epidemiology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.
J Jack LeeDepartment of Biostatistics, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-5469-9214
Jia WuDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-8392-8338
P Andrew FutrealDepartment of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0001-8663-2671
Alexandre ReubenDepartment of Thoracic/Head and Neck Medical Oncology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA. AReuben@mdanderson.org.ORCID 0000-0003-4510-0382
Humam KadaraDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA. HKadara@mdanderson.org.
Ignacio I WistubaDepartment of Translational Molecular Pathology, the University of Texas MD Anderson Cancer Center, Houston, TX, USA. IIWistuba@mdanderson.org.
Jianjun ZhangDepartment of Genomic Medicine, the University of Texas MD Anderson Cancer Center, Houston, TX, USA. JZhang20@mdanderson.org.ORCID 0000-0001-7872-3477
The University of Texas MD Anderson Cancer Center · USChinese Academy of Sciences · CNKagoshima University · JPCRUK Lung Cancer Centre of Excellence · GBNagasaki University · JPNYU Langone Health · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
The molecular and immune evolution in the progression of lung neoplasia to invasive adenocarcinomaR01CA234629 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ZHANG, JIANJUN · 2019 to 2023
$1.8M
NCI NIH HHS P50 CA070907NCI NIH HHS R01 CA234629
6 · The paper itself

Abstract

The mechanism by which anti-cancer immunity shapes early carcinogenesis of lung adenocarcinoma (ADC) is unknown. In this study, we characterize the immune contexture of invasive lung ADC and its precursors by transcriptomic immune profiling, T cell receptor (TCR) sequencing and multiplex immunofluorescence (mIF). Our results demonstrate that anti-tumor immunity evolved as a continuum from lung preneoplasia, to preinvasive ADC, minimally-invasive ADC and frankly invasive lung ADC with a gradually less effective and more intensively regulated immune response including down-regulation of immune-activation pathways, up-regulation of immunosuppressive pathways, lower infiltration of cytotoxic T cells (CTLs) and anti-tumor helper T cells (Th), higher infiltration of regulatory T cells (Tregs), decreased T cell clonality, and lower frequencies of top T cell clones in later-stages. Driver mutations, chromosomal copy number aberrations (CNAs) and aberrant DNA methylation may collectively impinge host immune responses and facilitate immune evasion, promoting the outgrowth of fit subclones in preneoplasia into dominant clones in invasive ADC.

Indexed as

TranscriptomeAdenocarcinoma in SituAdenocarcinoma of LungCarcinogenesisChromosome AberrationsClone CellsDNA Copy Number VariationsDNA MethylationGene Expression ProfilingGene Expression Regulation, NeoplasticHumansImmunity, InnateLungLung NeoplasmsNeoplasm ProteinsPrecancerous ConditionsNeoplasm Proteins

Identifiers

PMID33976164
PMCPMC8113327
OpenAlexW3160588558

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.