Evidence map›Paper›PMID 33974222›Full record

ReviewScience China. Life sciences2021

Plant multiscale networks: charting plant connectivity by multi-level analysis and imaging techniques.

Xi Zhang, Yi Man, Xiaohong Zhuang, Jinbo Shen, Yi Zhang, Yaning Cui, Meng Yu, Jingjing Xing, Guangchao Wang, Na Lian and 14 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Science China. Life sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Autophagy in plants.Autophagy reports · 2024
    Review
  10. SCAB1 coordinates sequential CaScience China. Life sciences · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Membrane Dynamics Regulated by Cytoskeleton in Plant Immunity.International journal of molecular sciences · 2023
    Review
  16. Article
  17. The Cytoskeleton in Plant Immunity: Dynamics, Regulation, and Function.International journal of molecular sciences · 2022
    Review
  18. Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Xi Zhang *Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Yi Man *Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Xiaohong Zhuang *School of Life Sciences, Centre for Cell & Developmental Biology and State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Hong Kong, 999077, China.
Jinbo Shen *State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China.
Yi Zhang *Key Laboratory of Cell Proliferation and Regulation Biology, Ministry of Education, College of Life Science, Beijing Normal University, Beijing, 100875, China.
Yaning CuiBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Meng YuBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Jingjing XingKey Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, 457004, China.
Guangchao WangCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Na LianBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Zijian HuCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Lingyu MaCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Weiwei ShenCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Shunyao YangCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Huimin XuCollege of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Jiahui BianCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Yanping JingCollege of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, 100083, China.
Xiaojuan LiBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Ruili LiBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China.
Tonglin MaoState Key Laboratory of Plant Physiology and Biochemistry, Department of Plant Sciences, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Yuling JiaoState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and National Center for Plant Gene Research, Beijing, 100101, China.
SodmergenKey Laboratory of Ministry of Education for Cell Proliferation and Differentiation, College of Life Sciences, Peking University, Beijing, 100871, China.
Haiyun RenKey Laboratory of Cell Proliferation and Regulation Biology, Ministry of Education, College of Life Science, Beijing Normal University, Beijing, 100875, China.
Jinxing LinBeijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Beijing, 100083, China. linjx@ibcas.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In multicellular and even single-celled organisms, individual components are interconnected at multiscale levels to produce enormously complex biological networks that help these systems maintain homeostasis for development and environmental adaptation. Systems biology studies initially adopted network analysis to explore how relationships between individual components give rise to complex biological processes. Network analysis has been applied to dissect the complex connectivity of mammalian brains across different scales in time and space in The Human Brain Project. In plant science, network analysis has similarly been applied to study the connectivity of plant components at the molecular, subcellular, cellular, organic, and organism levels. Analysis of these multiscale networks contributes to our understanding of how genotype determines phenotype. In this review, we summarized the theoretical framework of plant multiscale networks and introduced studies investigating plant networks by various experimental and computational modalities. We next discussed the currently available analytic methodologies and multi-level imaging techniques used to map multiscale networks in plants. Finally, we highlighted some of the technical challenges and key questions remaining to be addressed in this emerging field.

Indexed as

Diagnostic ImagingModels, BiologicalPlant Physiological PhenomenaSystems BiologyGenotypePhenotypePlant Cellsconnectivityconnectomecytoarchitecturecytoskeletonmembrane contact sitemulticellularitymulti-level imaging techniquesmultiscale networkorganelle interactiontopological analysis

Identifiers

PMID33974222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.