Evidence map›Paper›PMID 33974149›Full record

ArticleEuropean radiology2021

Detection of liver cirrhosis in standard T2-weighted MRI using deep transfer learning.

Sebastian Nowak, Narine Mesropyan, Anton Faron, Wolfgang Block, Martin Reuter, Ulrike I Attenberger, Julian A Luetkens, Alois M Sprinkart

Open access · hybridAbstract read
In one paragraph

Article in European radiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Sebastian Nowak *Department of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Narine Mesropyan *Department of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Anton FaronDepartment of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Wolfgang BlockDepartment of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Martin ReuterImage Analysis, German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany.
Ulrike I AttenbergerDepartment of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Julian A LuetkensDepartment of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany.
Alois M SprinkartDepartment of Diagnostic and Interventional Radiology, Quantitative Imaging Lab Bonn (QILaB), University Hospital Bonn (Universitätsklinikum Bonn), Venusberg-Campus 1, 53127, Bonn, Germany. sprinkart@uni-bonn.de.ORCID http://orcid.org/0000-0002-1435-9562
University Hospital Bonn · DEHarvard University · US

Funding

BONFOR 2020-2A-04
6 · The paper itself

Abstract

objectivesTo investigate the diagnostic performance of deep transfer learning (DTL) to detect liver cirrhosis from clinical MRI.

methodsThe dataset for this retrospective analysis consisted of 713 (343 female) patients who underwent liver MRI between 2017 and 2019. In total, 553 of these subjects had a confirmed diagnosis of liver cirrhosis, while the remainder had no history of liver disease. T2-weighted MRI slices at the level of the caudate lobe were manually exported for DTL analysis. Data were randomly split into training, validation, and test sets (70%/15%/15%). A ResNet50 convolutional neural network (CNN) pre-trained on the ImageNet archive was used for cirrhosis detection with and without upstream liver segmentation. Classification performance for detection of liver cirrhosis was compared to two radiologists with different levels of experience (4

resultsDice coefficients for automatic segmentation were above 0.98 for both validation and test data. The classification accuracy of liver cirrhosis on validation (vACC) and test (tACC) data for the DTL pipeline with upstream liver segmentation (vACC = 0.99, tACC = 0.96) was significantly higher compared to the resident (vACC = 0.88, p < 0.01; tACC = 0.91, p = 0.01) and to the board-certified radiologist (vACC = 0.96, p < 0.01; tACC = 0.90, p < 0.01).

conclusionThis proof-of-principle study demonstrates the potential of DTL for detecting cirrhosis based on standard T2-weighted MRI. The presented method for image-based diagnosis of liver cirrhosis demonstrated expert-level classification accuracy. KEY POINTS: • A pipeline consisting of two convolutional neural networks (CNNs) pre-trained on an extensive natural image database (ImageNet archive) enables detection of liver cirrhosis on standard T2-weighted MRI. • High classification accuracy can be achieved even without altering the pre-trained parameters of the convolutional neural networks. • Other abdominal structures apart from the liver were relevant for detection when the network was trained on unsegmented images.

Indexed as

Magnetic Resonance ImagingNeural Networks, ComputerFemaleHumansImage Processing, Computer-AssistedLiver CirrhosisMachine LearningMaleRetrospective StudiesDeep learningLiver cirrhosisMagnetic resonance imagingNeural networks, computer

Identifiers

PMID33974149
PMCPMC8523404
OpenAlexW3162790191

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.