Evidence map›Paper›PMID 33974130›Full record

ArticleHuman genetics2021

Pathogenic STX3 variants affecting the retinal and intestinal transcripts cause an early-onset severe retinal dystrophy in microvillus inclusion disease subjects.

Andreas R Janecke, Xiaoqin Liu, Rüdiger Adam, Sumanth Punuru, Arne Viestenz, Valeria Strauß, Martin Laass, Elizabeth Sanchez, Roberto Adachi, Martha P Schatz and 15 more

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Microvillus inclusion disease: a short review of literature.Gastroenterology and hepatology from bed to bench · 2025
    Article
  11. Syntaxin 3B: A SNARE Protein Required for Vision.International journal of molecular sciences · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. The role of syntaxins in retinal function and health.Frontiers in cellular neuroscience · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Proteomic analysis of diabetic retinas.Frontiers in endocrinology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 14 institutions in 6 countries.

Andreas R JaneckeDepartment of Pediatrics I, Medical University of Innsbruck, Anichstrasse 35, 6020, Innsbruck, Austria. andreas.janecke@i-med.ac.at.ORCID http://orcid.org/0000-0001-7155-0315
Xiaoqin LiuDepartment of Neurobiology and Anatomy, MSB 7.046, McGovern Medical School at the University of Texas HSC (UTHealth), 6431 Fannin Street, Houston, TX, 77030, USA.
Rüdiger AdamUniversity Children's Hospital, Medical Faculty Mannheim, Heidelberg University, 68167 Mannheim, Germany.
Sumanth PunuruDepartment of Neurobiology and Anatomy, MSB 7.046, McGovern Medical School at the University of Texas HSC (UTHealth), 6431 Fannin Street, Houston, TX, 77030, USA.
Arne ViestenzDepartment of Ophthalmology, University Medical Center Halle, Martin-Luther-University Halle-Wittenberg, Halle, Germany.ORCID http://orcid.org/0000-0003-1582-1760
Valeria StraußKlinik für Kinder- und Jugendmedizin, Universitätsklinikum Halle, Halle, Germany.
Martin LaassKlinik und Poliklinik f. Kinder- u. Jugendmedizin, University of Dresden, Dresden, Germany.
Elizabeth SanchezDepartment of Pulmonary Medicine, Division of Internal Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Roberto AdachiDepartment of Pulmonary Medicine, Division of Internal Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0002-0146-0768
Martha P SchatzDepartment of Ophthalmology, University of Texas Health Science Center, San Antonio, TX, USA.
Ujwala S SabooDepartment of Ophthalmology, University of Texas Health Science Center, San Antonio, TX, USA.ORCID http://orcid.org/0000-0002-4897-474X
Naveen MittalDepartment of Department of Pediatrics, Division of Pediatric Gastroenterology, University of Texas Health Science Center, San Antonio, TX, USA.
Klaus RohrschneiderAugenklinik, Universitätsklinikum Heidelberg, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1996-7935
Johanna EscherErasmus MC-Sophia Children's Hospital, Rotterdam, The Netherlands.ORCID http://orcid.org/0000-0003-4852-1158
Anuradha GaneshDepartment of Ophthalmology, Sultan Qaboos University Hospital, Muscat, Oman.
Sana Al ZuhaibiDepartment of Ophthalmology, Sultan Qaboos University Hospital, Muscat, Oman.
Fathiya Al MurshediGenetic and Developmental Medicine Clinic, Sultan Qaboos University Hospital, Muscat, Oman.ORCID http://orcid.org/0000-0002-6305-9718
Badr AlSaleemKing Fahad Medical City, Children's Specialized Hospital, Riyadh, Saudi Arabia.ORCID http://orcid.org/0000-0003-3348-4550
Majid AlfadhelGenetics Division and Medical Genomic Research Lab, King Saud Bin Abdulaziz University for Health Sciences (KSAU-HS), Riyadh, Saudi Arabia.ORCID http://orcid.org/0000-0002-9427-7240
Siham Al SinaniDepartment of Child Health, Sultan Qaboos University Hospital, Muscat, Oman.ORCID http://orcid.org/0000-0002-1650-4743
Fowzan S AlkurayaDepartment of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.ORCID http://orcid.org/0000-0003-4158-341X
Lukas A HuberDivision of Cell Biology, Medical University of Innsbruck, Innsbruck, Austria.ORCID http://orcid.org/0000-0003-1116-2120
Thomas MüllerDepartment of Pediatrics I, Medical University of Innsbruck, Anichstrasse 35, 6020, Innsbruck, Austria.
Ruth Heidelberger *Department of Neurobiology and Anatomy, MSB 7.046, McGovern Medical School at the University of Texas HSC (UTHealth), 6431 Fannin Street, Houston, TX, 77030, USA. ruth.heidelberger@uth.tmc.edu.ORCID http://orcid.org/0000-0002-8033-2050
Roger Janz *Department of Neurobiology and Anatomy, MSB 7.046, McGovern Medical School at the University of Texas HSC (UTHealth), 6431 Fannin Street, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0002-9872-0596
Sultan Qaboos University Hospital · OMInnsbruck Medical University · ATThe University of Texas Health Science Center at San Antonio · USHeidelberg University · DEThe University of Texas Health Science Center at Houston · USThe University of Texas MD Anderson Cancer Center · USErasmus MC - Sophia Children’s Hospital · NLKing Faisal Specialist Hospital & Research Centre · SAKing Saud bin Abdulaziz University for Health Sciences · SAKlinik und Poliklinik für Kinder- und Jugendmedizin · DEMartin Luther University Halle-Wittenberg · DENational Institutes of Health · USThe University of Texas Health Science Center · USUniversity Hospital in Halle · DE

Funding

Mechanisms of Neurotransmisson in Vertebrate RetinaR01EY012128 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI HEIDELBERGER, RUTH · 2003 to 2025
$8.0M
UTHouston Core Center for Vision ResearchP30EY028102 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MASSEY, STEPHEN C · 2017 to 2021
$3.1M
NEI NIH HHS P30 EY028102NEI NIH HHS R01 EY012128NIH HHS P30EY028102NIH HHS R01EY012128Oesterreichische Nationalbank (AT) 17968
6 · The paper itself

Abstract

Biallelic STX3 variants were previously reported in five individuals with the severe congenital enteropathy, microvillus inclusion disease (MVID). Here, we provide a significant extension of the phenotypic spectrum caused by STX3 variants. We report ten individuals of diverse geographic origin with biallelic STX3 loss-of-function variants, identified through exome sequencing, single-nucleotide polymorphism array-based homozygosity mapping, and international collaboration. The evaluated individuals all presented with MVID. Eight individuals also displayed early-onset severe retinal dystrophy, i.e., syndromic-intestinal and retinal-disease. These individuals harbored STX3 variants that affected both the retinal and intestinal STX3 transcripts, whereas STX3 variants affected only the intestinal transcript in individuals with solitary MVID. That STX3 is essential for retinal photoreceptor survival was confirmed by the creation of a rod photoreceptor-specific STX3 knockout mouse model which revealed a time-dependent reduction in the number of rod photoreceptors, thinning of the outer nuclear layer, and the eventual loss of both rod and cone photoreceptors. Together, our results provide a link between STX3 loss-of-function variants and a human retinal dystrophy. Depending on the genomic site of a human loss-of-function STX3 variant, it can cause MVID, the novel intestinal-retinal syndrome reported here or, hypothetically, an isolated retinal dystrophy.

Indexed as

Polymorphism, Single NucleotideAgedAged, 80 and overAlcohol OxidoreductasesAnimalsAutopsyCo-Repressor ProteinsExome SequencingEye Diseases, HereditaryFemaleGene Expression RegulationHomozygoteHumansIntestinal MucosaMalabsorption SyndromesMiceAlcohol OxidoreductasesCo-Repressor ProteinsCTBP2 protein, humanQa-SNARE ProteinsRNA, MessengerSensory Rhodopsins

Identifiers

PMID33974130
PMCPMC8263458
OpenAlexW3160237154

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.