Evidence map›Paper›PMID 33973099›Full record

ArticleProtoplasma2022

A common F-box gene regulates the leucine homeostasis of Medicago truncatula and Arabidopsis thaliana.

Anelia Iantcheva, Miroslava Zhiponova, Miglena Revalska, Jefri Heyman, Ivayla Dincheva, Ilian Badjakov, Nathan De Geyter, Irina Boycheva, Sofie Goormachtig, Lieven De Veylder

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Article in Protoplasma, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. In Vitro Multiplication and NMR Fingerprinting of RareMolecules (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Anelia IantchevaAgroBioInstitute, Agricultural Academy, Blvd. Dragan Tsankov 8, 1164, Sofia, Bulgaria. aneliaiancheva@abi.bg.ORCID https://orcid.org/0000-0001-8491-7040
Miroslava ZhiponovaDepartment of Plant Physiology, Faculty of Biology, Sofia University "St. Kliment Ohridski", 8 Dragan Tsankov blvd., 1164, Sofia, Bulgaria.ORCID https://orcid.org/0000-0001-7333-6558
Miglena RevalskaAgroBioInstitute, Agricultural Academy, Blvd. Dragan Tsankov 8, 1164, Sofia, Bulgaria.
Jefri HeymanDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID https://orcid.org/0000-0003-3266-4189
Ivayla DinchevaAgroBioInstitute, Agricultural Academy, Blvd. Dragan Tsankov 8, 1164, Sofia, Bulgaria.ORCID https://orcid.org/0000-0003-0276-4170
Ilian BadjakovAgroBioInstitute, Agricultural Academy, Blvd. Dragan Tsankov 8, 1164, Sofia, Bulgaria.ORCID https://orcid.org/0000-0003-3964-6039
Nathan De GeyterDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.
Irina BoychevaInstitute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, Acad. Georgi Bonchev Str., Bl. 21, 1113, Sofia, Bulgaria.
Sofie GoormachtigDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID https://orcid.org/0000-0001-6195-9889
Lieven De VeylderDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.ORCID https://orcid.org/0000-0003-1150-4426

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The F-box domain is a conserved structural protein motif that most frequently interacts with the SKP1 protein, the core of the SCFs (SKP1-CULLIN-F-box protein ligase) E3 ubiquitin protein ligases. As part of the SCF complexes, the various F-box proteins recruit substrates for degradation through ubiquitination. In this study, we functionally characterized an F-box gene (MtF-box) identified earlier in a population of Tnt1 retrotransposon-tagged mutants of Medicago truncatula and its Arabidopsis thaliana homolog (AtF-box) using gain- and loss-of-function plants. We highlighted the importance of MtF-box in leaf development of M. truncatula. Protein-protein interaction analyses revealed the 2-isopropylmalate synthase (IPMS) protein as a common interactor partner of MtF-box and AtF-box, being a key enzyme in the biosynthesis pathway of the branched-chain amino acid leucine. For further detailed analysis, we focused on AtF-box and its role during the cell division cycle. Based on this work, we suggest a mechanism for the role of the studied F-box gene in regulation of leucine homeostasis, which is important for growth.

Indexed as

ArabidopsisArabidopsis ProteinsF-Box ProteinsMedicago truncatulaPlant ProteinsHomeostasisLeucineUbiquitin-Protein LigasesArabidopsis ProteinsF-Box ProteinsLeucinePlant ProteinsUbiquitin-Protein LigasesBranched-chain amino acid (BCAA) levelM. truncatula and A. thaliana F-box geneProtein interactorTranscript level

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.