Evidence map›Paper›PMID 33972666›Full record

ArticleCommunications biology2021

Pests, diseases, and aridity have shaped the genome of Corymbia citriodora.

Adam L Healey, Mervyn Shepherd, Graham J King, Jakob B Butler, Jules S Freeman, David J Lee, Brad M Potts, Orzenil B Silva-Junior, Abdul Baten, Jerry Jenkins and 12 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Complete Genome of Rose Myrtle,Plants (Basel, Switzerland) · 2023
    Article
  12. Chromosome-scale assemblies ofFrontiers in plant science · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. A high-quality draft genome forGigaByte (Hong Kong, China) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 4 countries.

Adam L HealeyHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA. ahealey@hudsonalpha.org.ORCID http://orcid.org/0000-0002-3088-6856
Mervyn ShepherdSouthern Cross Plant Science, Southern Cross University, Lismore, NSW, Australia.ORCID http://orcid.org/0000-0001-8708-4670
Graham J KingSouthern Cross Plant Science, Southern Cross University, Lismore, NSW, Australia.ORCID http://orcid.org/0000-0002-5975-6051
Jakob B ButlerSchool of Natural Sciences, University of Tasmania, Hobart, TAS, Australia.ORCID http://orcid.org/0000-0003-1353-3765
Jules S FreemanSchool of Natural Sciences, University of Tasmania, Hobart, TAS, Australia.ORCID http://orcid.org/0000-0003-1166-9976
David J LeeForest Industries Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia.ORCID http://orcid.org/0000-0002-5847-0836
Brad M PottsSchool of Natural Sciences, University of Tasmania, Hobart, TAS, Australia.
Orzenil B Silva-JuniorEMBRAPA Genetic Resources and Biotechnology, Brasília, Brazil.
Abdul BatenSouthern Cross Plant Science, Southern Cross University, Lismore, NSW, Australia.ORCID http://orcid.org/0000-0003-4673-0685
Jerry JenkinsHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-7943-3997
Shengqiang ShuDepartment of Energy Joint Genome Institute, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-4336-8994
John T LovellHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-8938-1166
Avinash SreedasyamHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
Jane GrimwoodHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-8356-8325
Agnelo FurtadoUniversity of Queensland/QAAFI, Brisbane, QLD, Australia.
Dario GrattapagliaEMBRAPA Genetic Resources and Biotechnology, Brasília, Brazil.
Kerrie W BarryDepartment of Energy Joint Genome Institute, Berkeley, CA, USA.
Hope HundleyDepartment of Energy Joint Genome Institute, Berkeley, CA, USA.
Blake A SimmonsUniversity of Queensland/QAAFI, Brisbane, QLD, Australia.ORCID http://orcid.org/0000-0002-1332-1810
Jeremy SchmutzHudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0001-8062-9172
René E VaillancourtSchool of Natural Sciences, University of Tasmania, Hobart, TAS, Australia.
Robert J HenryUniversity of Queensland/QAAFI, Brisbane, QLD, Australia.ORCID http://orcid.org/0000-0002-4060-0292
HudsonAlpha Institute for Biotechnology · USJoint Genome Institute · USUniversity of Tasmania · AUThe University of Queensland · AUBrazilian Agricultural Research Corporation · BRSouthern Cross University · AUCooperative Trials Group for Neuro-Oncology · AUUniversity of the Sunshine Coast · AUWesley Research Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corymbia citriodora is a member of the predominantly Southern Hemisphere Myrtaceae family, which includes the eucalypts (Eucalyptus, Corymbia and Angophora; ~800 species). Corymbia is grown for timber, pulp and paper, and essential oils in Australia, South Africa, Asia, and Brazil, maintaining a high-growth rate under marginal conditions due to drought, poor-quality soil, and biotic stresses. To dissect the genetic basis of these desirable traits, we sequenced and assembled the 408 Mb genome of Corymbia citriodora, anchored into eleven chromosomes. Comparative analysis with Eucalyptus grandis reveals high synteny, although the two diverged approximately 60 million years ago and have different genome sizes (408 vs 641 Mb), with few large intra-chromosomal rearrangements. C. citriodora shares an ancient whole-genome duplication event with E. grandis but has undergone tandem gene family expansions related to terpene biosynthesis, innate pathogen resistance, and leaf wax formation, enabling their successful adaptation to biotic/abiotic stresses and arid conditions of the Australian continent.

Indexed as

Gene DuplicationGene RearrangementGenome, PlantChromosome MappingChromosomes, PlantMyrtaceaePlant ProteinsPlant Proteins

Identifiers

PMID33972666
PMCPMC8110574
OpenAlexW3163439426

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.