Evidence map›Paper›PMID 33970958›Full record

ArticlePLoS pathogens2021

Host factor Rab11a is critical for efficient assembly of influenza A virus genomic segments.

Julianna Han, Ketaki Ganti, Veeresh Kumar Sali, Carly Twigg, Yifeng Zhang, Senthamizharasi Manivasagam, Chieh-Yu Liang, Olivia A Vogel, Iris Huang, Shanan N Emmanuel and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Julianna HanDepartment of Microbiology, University of Chicago, Chicago, Illinois, United States of America.ORCID 0000-0002-3402-2609
Ketaki GantiDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia, United States of America.ORCID 0000-0002-9687-3505
Veeresh Kumar SaliDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.
Carly TwiggDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0002-7972-2369
Yifeng ZhangDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0002-7348-0223
Senthamizharasi ManivasagamDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.
Chieh-Yu LiangDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0003-4624-7212
Olivia A VogelDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0002-7918-0395
Iris HuangDepartment of Microbiology, University of Chicago, Chicago, Illinois, United States of America.ORCID 0000-0002-8347-7167
Shanan N EmmanuelDepartment of Microbiology, University of Chicago, Chicago, Illinois, United States of America.
Jesse PlungDepartment of Microbiology, University of Chicago, Chicago, Illinois, United States of America.ORCID 0000-0003-1950-7031
Lillianna RadoshevichDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0003-0294-9300
Jasmine T PerezDepartment of Microbiology, University of Chicago, Chicago, Illinois, United States of America.
Anice C LowenDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia, United States of America.ORCID 0000-0002-9829-112X
Balaji ManicassamyDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0003-1964-0967
University of Iowa · USUniversity of Chicago · USEmory University · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
UNIVERSITY OF CHICAGO PREPR25GM066522 · NIGMS · UNIVERSITY OF CHICAGO · PI CARRILLO, ROBERT ARNULFO, RANDALL, GLENN C · 2004 to 2024
$6.7M
Discovery of Novel Mechanisms of Action of Ubiquitin-Like Proteins in Cellular Stress PathwaysR35GM137961 · NIGMS · UNIVERSITY OF IOWA · PI Lilliana RADOSHEVICH · 2020 to 2026
$2.8M
ENDOTHELIAL CELL TROPISM IN THE PATHOGENESIS AND HOST RESPONSE AGAINST INFLUENZA VIRUSES - RESUBMISSION 01R01AI127775 · NIAID · UNIVERSITY OF IOWA · PI MANICASSAMY, BALAJI · 2018 to 2022
$2.8M
Impact of selective genome packaging on influenza A virus reassortmentR01AI125268 · NIAID · EMORY UNIVERSITY · PI LOWEN, ANICE C · 2016 to 2019
$1.9M
Modulation of Influenza Virus Replication and Fitness by Adenosine DeaminasesR01AI123359 · NIAID · UNIVERSITY OF IOWA · PI MANICASSAMY, BALAJI · 2016 to 2020
$1.9M
NIAID NIH HHS HHSN272201400004CNIAID NIH HHS R01 AI123359NIAID NIH HHS R01 AI125268NIAID NIH HHS R01 AI127775NIGMS NIH HHS R25 GM066522NIGMS NIH HHS R35 GM137961NIGMS NIH HHS T32 GM007183
6 · The paper itself

Abstract

It is well documented that influenza A viruses selectively package 8 distinct viral ribonucleoprotein complexes (vRNPs) into each virion; however, the role of host factors in genome assembly is not completely understood. To evaluate the significance of cellular factors in genome assembly, we generated a reporter virus carrying a tetracysteine tag in the NP gene (NP-Tc virus) and assessed the dynamics of vRNP localization with cellular components by fluorescence microscopy. At early time points, vRNP complexes were preferentially exported to the MTOC; subsequently, vRNPs associated on vesicles positive for cellular factor Rab11a and formed distinct vRNP bundles that trafficked to the plasma membrane on microtubule networks. In Rab11a deficient cells, however, vRNP bundles were smaller in the cytoplasm with less co-localization between different vRNP segments. Furthermore, Rab11a deficiency increased the production of non-infectious particles with higher RNA copy number to PFU ratios, indicative of defects in specific genome assembly. These results indicate that Rab11a+ vesicles serve as hubs for the congregation of vRNP complexes and enable specific genome assembly through vRNP:vRNP interactions, revealing the importance of Rab11a as a critical host factor for influenza A virus genome assembly.

Indexed as

Genome, ViralVirus AssemblyA549 CellsHEK293 CellsHumansInfluenza A virusInfluenza, Humanrab11 GTP-Binding Proteinsrab GTP-Binding ProteinsRibonucleoproteinsViral ProteinsVirus Replicationrab11 GTP-Binding Proteinsrab GTP-Binding ProteinsRibonucleoproteinsViral Proteins

Identifiers

PMID33970958
PMCPMC8136845
OpenAlexW3140583120

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.