Evidence map›Paper›PMID 33970440›Full record

ArticleMolecular diagnosis & therapy2021

Longitudinal Relationship between Idylla Plasma ctBRAF V600 Mutation Detection and Tumor Burden in Patients with Metastatic Melanoma.

Mark William Linder, Michael E Egger, Tracy Van Meter, Shesh N Rai, Roland Valdes, Melissa Barousse Hall, Xiaoyong Wu, Norah Alghamdi, Jason A Chesney

Open access · greenAbstract read
In one paragraph

Article in Molecular diagnosis & therapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Mark William LinderDepartment of Pathology and Laboratory Medicine, University of Louisville School of Medicine, 511 S. Floyd Street, Louisville, KY, 40202, USA. mwlind01@louisville.edu.ORCID 0000-0002-2257-0579
Michael E EggerDivision of Surgical Oncology, Department of Surgery, University of Louisville School of Medicine, Louisville, KY, USA.
Tracy Van MeterDepartment of Radiology, University of Louisville School of Medicine, Louisville, KY, USA.
Shesh N RaiBiostatistics and Bioinformatics Facility, James Graham Brown Cancer Center, University of Louisville School of Medicine, Louisville, KY, USA.
Roland ValdesDepartment of Pathology and Laboratory Medicine, University of Louisville School of Medicine, 511 S. Floyd Street, Louisville, KY, 40202, USA.
Melissa Barousse HallJames Graham Brown Cancer Center, University of Louisville School of Medicine, Louisville, KY, USA.
Xiaoyong WuBiostatistics and Bioinformatics Facility, James Graham Brown Cancer Center, University of Louisville School of Medicine, Louisville, KY, USA.
Norah AlghamdiDepartment of Pathology and Laboratory Medicine, University of Louisville School of Medicine, 511 S. Floyd Street, Louisville, KY, 40202, USA.
Jason A ChesneyJames Graham Brown Cancer Center, University of Louisville School of Medicine, Louisville, KY, USA.
University of Louisville · US

Funding

Understanding the Host-Microbiome-Therapeutic Triad: Implications for Designing Alternative IntravaginalP20GM125504 · NIGMS · UNIVERSITY OF LOUISVILLE · PI Shirin Ghods · 2018 to 2026
$24.4M
Role of oxidized linoleic acid metabolites in the pathogenesis of alcoholic liver diseaseP20GM113226 · NIGMS · UNIVERSITY OF LOUISVILLE · PI MCCLAIN, CRAIG J. · 2016 to 2025
$24.1M
The role of ECM-mediated mechanosignaling on regional immunosuppression in GBMP20GM135004 · NIGMS · UNIVERSITY OF LOUISVILLE · PI Sharmila Nair · 2020 to 2026
$21.1M
ConProject-006U54HL120163 · NHLBI · AMERICAN HEART ASSOCIATION · PI BHATNAGAR, ARUNI, ROBERTSON, ROSE MARIE · 2018 to 2022
$18.8M
Superfund Training CoreP42ES023716 · NIEHS · UNIVERSITY OF LOUISVILLE · PI SRIVASTAVA, SANJAY · 2017 to 2025
$18.1M
University of Louisville Center for Integrative Environmental Health SciencesP30ES030283 · NIEHS · UNIVERSITY OF LOUISVILLE · PI Amanda Jo LeBlanc · 2020 to 2026
$10.0M
TBDP30GM127607 · NIGMS · UNIVERSITY OF LOUISVILLE · PI BHATNAGAR, ARUNI · 2018 to 2022
$6.3M
Urban Greenness and Cardiovascular HealthR01ES029846 · NIEHS · UNIVERSITY OF LOUISVILLE · PI Aruni Bhatnagar · 2018 to 2026
$6.2M
Mechanism for arsenic induced carcinogenesisR01ES027778 · NIEHS · UNIVERSITY OF LOUISVILLE · PI J CHRISTOPHER STATES · 2017 to 2026
$4.3M
Environmental Liver DiseaseR35ES028373 · NIEHS · UNIVERSITY OF LOUISVILLE · PI CAVE, MATTHEW C · 2017 to 2024
$4.0M
NHLBI NIH HHS U54 HL120163NIEHS NIH HHS P30 ES030283NIEHS NIH HHS P42 ES023716NIEHS NIH HHS R01 ES027778NIEHS NIH HHS R01 ES029846NIEHS NIH HHS R35 ES028373NIGMS NIH HHS P20 GM113226NIGMS NIH HHS P20 GM125504NIGMS NIH HHS P20 GM135004NIGMS NIH HHS P30 GM127607
6 · The paper itself

Abstract

backgroundCirculating tumor DNA (ctDNA) may complement radiography for interim assessment of patients with cancer.

objectiveOur objective was to explore the relationship between changes in plasma ctDNA versus radiographic imaging among patients with metastatic melanoma.

methodsUsing the Idylla system, we measured B-Raf proto-oncogene (BRAF) V600 ctDNA in plasma from 15 patients with BRAF V600E/K-positive primary tumors undergoing standard-of-care monitoring, including cross-sectional computed tomography (CT) imaging. BRAF V600 mutant allele frequency (%MAF) was calculated from the Idylla Cq values and directly measured using droplet digital polymerase chain reaction (ddPCR).

resultsThe Idylla ctDNA assay demonstrated 91% sensitivity, 96% specificity, 91% positive predictive value, and 96% negative predictive value for the presence of > 93 mm metastatic disease. Qualitative ctDNA results corresponded to changes in RECIST (Response Evaluation Criteria in Solid Tumors) 1.1 status determined by CT imaging in 11 of 15 subjects (73%). Calculated %MAF results correlated with ddPCR (R

conclusionsOverall, interim ctDNA results provided evidence of partial response or progressive disease an average of 82 days before radiography. This pilot study supports the feasibility of using the Idylla plasma BRAF V600 ctDNA assay as a complement to CT scanning for routine monitoring of therapeutic response. Somatic mutation quantification based on Cq values shows promise for identifying disease progression and warrants further validation.

Indexed as

MutationCirculating Tumor DNACross-Sectional StudiesFeasibility StudiesHumansLongitudinal StudiesMaleMelanomaNeoplasm MetastasisPilot ProjectsProto-Oncogene Proteins B-rafSensitivity and SpecificityStandard of CareTomography, X-Ray ComputedTumor BurdenBRAF protein, humanCirculating Tumor DNAProto-Oncogene Proteins B-raf

Identifiers

PMID33970440
PMCPMC8827645
OpenAlexW3163747309

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.