Evidence map›Paper›PMID 33968045›Full record

ArticleFrontiers in immunology2021

Tumor Mutation Burden and Immune Invasion Characteristics in Triple Negative Breast Cancer: Genome High-Throughput Data Analysis.

Chundi Gao, Huayao Li, Cun Liu, Xiaowei Xu, Jing Zhuang, Chao Zhou, Lijuan Liu, Fubin Feng, Changgang Sun

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

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  15. Tislelizumab: an effective treatment option for early-stage triple-negative breast cancer.Translational breast cancer research : a journal focusing on translational research in breast cancer · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Chundi GaoCollege of First Clinical Medicine, Shandong University of Traditional Chinese Medicine, Jinan, China.
Huayao LiCollege of Basic Medical, Shandong University of Traditional Chinese Medicine, Jinan, China.
Cun LiuCollege of First Clinical Medicine, Shandong University of Traditional Chinese Medicine, Jinan, China.
Xiaowei XuCollege of First Clinical Medicine, Shandong University of Traditional Chinese Medicine, Jinan, China.
Jing ZhuangDepartment of Oncology, Weifang Traditional Chinese Hospital, Weifang, China.
Chao ZhouCollege of Basic Medical, Shandong University of Traditional Chinese Medicine, Jinan, China.
Lijuan LiuCollege of Basic Medical, Shandong University of Traditional Chinese Medicine, Jinan, China.
Fubin FengCollege of Basic Medical, Shandong University of Traditional Chinese Medicine, Jinan, China.
Changgang SunDepartment of Oncology, Weifang Traditional Chinese Hospital, Weifang, China.
Shandong University of Traditional Chinese Medicine · CNWeifang Chinese Medicine Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, the emergence of immunotherapy has provided a new perspective for the treatment and management of triple-negative breast cancer (TNBC). However, the relationship between tumor mutation burden (TMB) and immune infiltration and the prognosis of TNBC remains unclear. In this study, to explore the immunogenicity of TNBC, we divided patients with TNBC into high and low TMB groups based on the somatic mutation data of TNBC in The Cancer Genome Atlas (TCGA), and screened out genes with mutation rate ≥10. Then, Kaplan-Meier survival analysis revealed that the 5-year survival rate of the high TMB group was much higher than that of the low TMB group and the two groups also showed differences in immune cell infiltration. Further exploration found that the FAT3 gene, which displays significant difference and a higher mutation rate between the two groups, is not only significantly related to the prognosis of TNBC patients but also exhibits difference in immune cell infiltration between the wild group and the mutant group of the FAT3 gene. The results of gene set enrichment analysis and drug sensitivity analysis further support the importance of the FAT3 gene in TNBC. This study reveals the characteristics of TMB and immune cell infiltration in triple-negative breast cancer and their relationship with prognosis, to provide new biomarkers and potential treatment options for the future treatment of TNBC. The FAT3 gene, as a risk predictor gene of TNBC, is considered a potential biological target and may provide new insight for the treatment of TNBC.

Indexed as

Gene Expression Regulation, NeoplasticBiomarkers, TumorData AnalysisFemaleGene Expression ProfilingGenome, HumanHigh-Throughput Screening AssaysHumansKaplan-Meier EstimateMutationPrognosisTriple Negative Breast NeoplasmsBiomarkers, Tumordrug sensitivityGSEA pathway analysisimmune infiltrationtriple-negative breast cancertumor mutation burden

Identifiers

PMID33968045
PMCPMC8097167
OpenAlexW3159812111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.