Evidence map›Paper›PMID 33966095›Full record

ArticleMicrobial ecology2022

Exploring the Role of the NO-Detoxifying Enzyme HmpA in the Evolution of Domesticated Alfalfa Rhizobia.

Romina Frare, Cecilia Pascuan, Luisa Galindo-Sotomonte, Wayne McCormick, Gabriela Soto, Nicolás Ayub

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Romina FrareInstituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina.
Cecilia PascuanInstituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina.
Luisa Galindo-SotomonteInstituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina.
Wayne McCormickOttawa Research and Development Centre (AAFC), Ottawa, ON, Canada.
Gabriela SotoInstituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina.
Nicolás AyubInstituto de Agrobiotecnología y Biología Molecular (INTA-CONICET), Buenos Aires, Argentina. nicoayub@gmail.com.ORCID http://orcid.org/0000-0001-5012-240X
Consejo Nacional de Investigaciones Científicas y Técnicas · ARInstituto de Agrobiotecnología del Litoral · ARNational Association of Friendship Centres · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have previously shown the extensive loss of genes during the domestication of alfalfa rhizobia and the high nitrous oxide emission associated with the extreme genomic instability of commercial inoculants. In the present note, we describe the molecular mechanism involved in the evolution of alfalfa rhizobia. Genomic analysis showed that most of the gene losses in inoculants are due to large genomic deletions rather than to small deletions or point mutations, a fact consistent with recurrent DNA double-strand breaks (DSBs) at numerous locations throughout the microbial genome. Genetic analysis showed that the loss of the NO-detoxifying enzyme HmpA in inoculants results in growth inhibition and high DSB levels under nitrosative stress, and large genomic deletions in planta but not in the soil. Therefore, besides its known function in the effective establishment of the symbiosis, HmpA can play a critical role in the preservation of the genomic integrity of alfalfa rhizobia under host-derived nitrosative stress.

Indexed as

RhizobiumGenomicsHempaMedicago sativaSymbiosisHempaDNA damageDomesticationEvolutionary mechanismNitric oxideNO detoxification

Identifiers

PMID33966095
OpenAlexW3162711898

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.