Evidence map›Paper›PMID 33966053›Full record

ArticlePediatric research2022

SNPs of the IFNL favour spontaneous clearance of HCV infection in children.

Giusi Mangone, Daniele Serranti, Elisa Bartolini, Veronica Vigna, Greta Mastrangelo, Silvia Ricci, Sandra Trapani, Chiara Azzari, Massimo Resti, Giuseppe Indolfi

Abstract read
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In one paragraph

Article in Pediatric research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Giusi MangoneImmunology Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Daniele SerrantiPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Elisa BartoliniPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Veronica VignaPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Greta MastrangeloPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Silvia RicciDepartment of Health Sciences, University of Florence, Firenze, Italy.
Sandra TrapaniPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Chiara AzzariImmunology Unit, Meyer Children's University Hospital of Florence, Firenze, Italy.
Massimo RestiDepartment of Health Sciences, University of Florence, Firenze, Italy.
Giuseppe IndolfiPaediatric and Liver Unit, Meyer Children's University Hospital of Florence, Firenze, Italy. giuseppe.indolfi@unifi.it.ORCID http://orcid.org/0000-0003-3830-9823
Meyer Children's Hospital · ITUniversity of Florence · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBoth spontaneous and treatment-induced clearance of hepatitis C virus (HCV) in adults have been associated with genetic polymorphisms in the interferon-λ genes. The aim of the present study was to confirm the association between the rs12979860 and evaluate the association between the rs368234815 and the rs4803217 single-nucleotide polymorphisms (SNPs) of the interferon-λ genes and the outcome of the infection in children.

methodsAlleles and genotypes frequencies of 32 children, who presented spontaneous clearance of the virus and 135 children, with viral persistence were compared with ethnically matched controls obtained from the 1000 Genomes Project and the International HapMap Project databases.

resultsThe frequencies of the C/C genotype of rs12979860, the TT/TT of the rs368234815 and the A/C of the rs4803217 were higher in the clearance group than in children with viral persistence (C/C versus T/T + C/T odds ratio (OR): 2.6; 90% confidence intervals (CI): 1.3-5; p = 0.01; TT/TT versus ΔG/TT + ΔG/ΔG OR: 2.8; 90% CI: 1.4-5.5; p = 0.01; and A/A versus A/C OR: 8.3; 90% CI: 1.5-45.9; p = 0.017, respectively) and with the ethnically matched controls.

conclusionsThe rs12979860, the rs368234815 and the rs4803217 SNPs are associated with spontaneous clearance of HCV in children. IMPACT: Innate immune system response has a key role in the outcome of vertically acquired HCV infection in children. The rs12979860, the rs368234815 and the rs4803217 SNPs are associated with spontaneous clearance of HCV in children. Interferons-λ activate the Janus kinase-Stat pathway, which in turn induces several interferon-stimulated genes, leading to suppression of HCV replication both in vivo and in vitro.

Indexed as

Hepatitis CInterferonsAntiviral AgentsChildGenotypeHumansInterferon LambdaPolymorphism, Single NucleotideAntiviral AgentsInterferon LambdaInterferons

Identifiers

PMID33966053
OpenAlexW3163658587

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.