Evidence map›Paper›PMID 33963087›Full record

SynthesisThorax2021

Interaction between Genetic Risk Scores for reduced pulmonary function and smoking, asthma and endotoxin.

Sinjini Sikdar, Annah B Wyss, Mi Kyeong Lee, Thanh T Hoang, Marie Richards, Laura E Beane Freeman, Christine Parks, Peter S Thorne, John L Hankinson, David M Umbach and 2 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Thorax, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Rapid FEVJournal of Korean medical science · 2023
    Article
  5. Gene-environment interactions in childhood asthma revisited; expanding the interaction concept.Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology · 2022
    Review
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Sinjini SikdarDepartment of Mathematics and Statistics, Old Dominion University, Norfolk, Virginia, USA.ORCID 0000-0003-1230-5162
Annah B WyssEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Mi Kyeong LeeEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Thanh T HoangEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Marie RichardsWestat, Durham, North Carolina, USA.
Laura E Beane FreemanOccupational and Environmental Epidemiology Branch, National Cancer Institute, Bethesda, Maryland, USA.
Christine ParksEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Peter S ThorneDepartment of Occupational and Environmental Health, University of Iowa, Iowa City, Iowa, USA.
John L HankinsonHankinson Consulting, Athens, Georgia, USA.
David M UmbachBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Alison Motsinger-ReifBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA.
Stephanie J LondonEpidemiology Branch, National Institute of Environmental Health Sciences, Durham, North Carolina, USA london2@niehs.nih.gov.ORCID 0000-0003-4911-5290

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Jong Sung Kim · 1990 to 2026
$40.5M
Health Effects Of Exposures In AgricultureZIAES049030 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SANDLER, DALE P · 2009 to 2025
$11.2M
Collaborative Applied StatisticsZIAES103335 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MOTSINGER-REIF, ALISON · 2019 to 2025
$9.0M
Genetics and Environment in Adult Respiratory, Allergic and Cardiac diseaseZIAES043012 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI LONDON, STEPHANIE · 2009 to 2025
$6.4M
Lung Health Study in the Agricultural Health StudyZIAES102385 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI LONDON, STEPHANIE · 2009 to 2025
$6.1M
STUDIES OF OCCUPATIONAL CANCER--PESTICIDESZ01CP010119 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI ALAVANJA, MICHAEL · 1996 to 2008
$5.0M
Statistical techniques applied to environmental health sciencesZIAES103126 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI UMBACH, DAVID M · 2012 to 2025
$1.0M
HEALTH EFFECTS OF EXPOSURES IN AGRICULTUREZ01ES049030 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SANDLER, DALE P · 1997 to 2008
$889k
Genetic /Environment Factors In Nonmalignant Resp DisZ01ES043012 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI LONDON, STEPHANIE JOAN · 1999 to 2008
$340k
ARRA NIH HHSIntramural NIH HHS Z01 CP010119Intramural NIH HHS Z01 ES043012Intramural NIH HHS Z01 ES049030Intramural NIH HHS ZIA ES102385NIEHS NIH HHS N01 ES055546NIEHS NIH HHS P30 ES005605NIH HHS HHSN263201600003I
6 · The paper itself

Abstract

rationaleGenome-wide association studies (GWASs) have identified numerous loci associated with lower pulmonary function. Pulmonary function is strongly related to smoking and has also been associated with asthma and dust endotoxin. At the individual SNP level, genome-wide analyses of pulmonary function have not identified appreciable evidence for gene by environment interactions. Genetic Risk Scores (GRSs) may enhance power to identify gene-environment interactions, but studies are few.

methodsWe analysed 2844 individuals of European ancestry with 1000 Genomes imputed GWAS data from a case-control study of adult asthma nested within a US agricultural cohort. Pulmonary function traits were FEV

resultsEach trait was highly significantly associated with its GRS (all three p values<8.9×10

conclusionsEvaluation of interactions using GRSs supports a greater impact of increased genetic susceptibility on reduced pulmonary function in the presence of smoking or asthma.

Indexed as

AsthmaGenome-Wide Association StudyAdultCase-Control StudiesEndotoxinsGenetic Predisposition to DiseaseHumansPolymorphism, Single NucleotideRisk FactorsSmokingEndotoxinsasthmarespiratory measurementtobacco and the lung

Identifiers

PMID33963087
PMCPMC8572320

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.