Evidence map›Paper›PMID 33961099›Full record

ReviewCurrent genetics2021

A deep dive into the RecQ interactome: something old and something new.

Robert H Simmons, Cody M Rogers, Matthew L Bochman

Open access · greenAbstract readReview
In one paragraph

Review in Current genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Chlorophyll deficient 5 encodes a DNA helicase and is essential for chloroplast development in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Robert H SimmonsMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN, USA.
Cody M RogersMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN, USA.
Matthew L BochmanMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN, USA. bochman@indiana.edu.ORCID http://orcid.org/0000-0002-2807-0452
Indiana University Bloomington · USThe University of Texas Health Science Center at San Antonio · US

Funding

DNA helicases and associated factors in genome stabilityR35GM133437 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BOCHMAN, MATTHEW LINNE · 2019 to 2023
$2.4M
American Cancer Society RSG-16-180-01-DMCNIGMS NIH HHS R35 GM133437NIH HHS 1R35GM133437
6 · The paper itself

Abstract

RecQ family helicases are found in all domains of life and play roles in multiple processes that underpin genomic integrity. As such, they are often referred to as guardians or caretakers of the genome. Despite their importance, however, there is still much we do not know about their basic functions in vivo, nor do we fully understand how they interact in organisms that encode more than one RecQ family member. We recently took a multi-omics approach to better understand the Saccharomyces cerevisiae Hrq1 helicase and its interaction with Sgs1, with these enzymes being the functional homologs of the disease-linked RECQL4 and BLM helicases, respectively. Using synthetic genetic array analyses, immuno-precipitation coupled to mass spectrometry, and RNA-seq, we found that Hrq1 and Sgs1 likely participate in many pathways outside of the canonical DNA recombination and repair functions for which they are already known. For instance, connections to transcription, ribosome biogenesis, and chromatin/chromosome organization were uncovered. These recent results are briefly detailed with respect to current knowledge in the field, and possible follow-up experiments are suggested. In this way, we hope to gain a wholistic understanding of these RecQ helicases and how their mutation leads to genomic instability.

Indexed as

ImmunoprecipitationMass SpectrometryRecQ HelicasesRNA-SeqSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHrq1 protein, S cerevisiaeRecQ HelicasesSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiaeBLMDNA helicaseHrq1RecQRECQL4Sgs1

Identifiers

PMID33961099
PMCPMC9274705
OpenAlexW3158138038

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.