Evidence map›Paper›PMID 33959967›Full record

ArticleThe New phytologist2021

Aldoximes are precursors of auxins in Arabidopsis and maize.

Veronica C Perez, Ru Dai, Bing Bai, Breanna Tomiczek, Bryce C Askey, Yi Zhang, Garret M Rubin, Yousong Ding, Alexander Grenning, Anna K Block and 1 more

Open access · greenAbstract read
In one paragraph

Article in The New phytologist, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The auxin gatekeepers: Evolution and diversification of the YUCCA family.The Plant journal : for cell and molecular biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Do Opposites Attract? Auxin-Abscisic Acid Crosstalk: New Perspectives.International journal of molecular sciences · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Metabolite analysis of ArabidopsisPlant signaling & behavior · 2021
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Veronica C PerezHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-3526-2487
Ru DaiHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-2040-7049
Bing BaiHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-6471-3259
Breanna TomiczekDepartment of Chemistry, University of Florida, Gainesville, FL, 32611, USA.
Bryce C AskeyHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-4449-6891
Yi ZhangDepartment of Medicinal Chemistry, University of Florida, Gainesville, FL, 32610, USA.
Garret M RubinDepartment of Medicinal Chemistry, University of Florida, Gainesville, FL, 32610, USA.
Yousong DingDepartment of Medicinal Chemistry, University of Florida, Gainesville, FL, 32610, USA.
Alexander GrenningDepartment of Chemistry, University of Florida, Gainesville, FL, 32611, USA.
Anna K BlockCenter for Medical, Agricultural and Veterinary Entomology, US Department of Agriculture-Agricultural Research Service, Gainesville, FL, 32608, USA.ORCID 0000-0003-1689-4005
Jeongim KimHorticultural Sciences Department, University of Florida, Gainesville, FL, 32611, USA.ORCID 0000-0002-5618-3948
University of Florida · USAgricultural Research Service · US

Funding

NIH Equipment Supplement to R35GM128742R35GM128742 · NIGMS · UNIVERSITY OF FLORIDA · PI Yousong Ding · 2018 to 2026
$3.4M
NIGMS NIH HHS R35 GM128742
6 · The paper itself

Abstract

Two natural auxins, phenylacetic acid (PAA) and indole-3-acetic acid (IAA), play crucial roles in plant growth and development. One route of IAA biosynthesis uses the glucosinolate intermediate indole-3-acetaldoxime (IAOx) as a precursor, which is thought to occur only in glucosinolate-producing plants in Brassicales. A recent study showed that overproducing phenylacetaldoxime (PAOx) in Arabidopsis increases PAA production. However, it remains unknown whether this increased PAA resulted from hydrolysis of PAOx-derived benzyl glucosinolate or, like IAOx-derived IAA, is directly converted from PAOx. If glucosinolate hydrolysis is not required, aldoxime-derived auxin biosynthesis may occur beyond Brassicales. To better understand aldoxime-derived auxin biosynthesis, we conducted an isotope-labelled aldoxime feeding assay using an Arabidopsis glucosinolate-deficient mutant sur1 and maize, and transcriptomics analysis. Our study demonstrated that the conversion of PAOx to PAA does not require glucosinolates in Arabidopsis. Furthermore, maize produces PAA and IAA from PAOx and IAOx, respectively, indicating that aldoxime-derived auxin biosynthesis also occurs in maize. Considering that aldoxime production occurs widely in the plant kingdom, aldoxime-derived auxin biosynthesis is likely to be more widespread than originally believed. A genome-wide transcriptomics study using PAOx-overproduction plants identified complex metabolic networks among IAA, PAA, phenylpropanoid and tryptophan metabolism.

Indexed as

ArabidopsisArabidopsis ProteinsIndoleacetic AcidsOximesZea maysArabidopsis ProteinsIndoleacetic AcidsOximesaldoximeArabidopsis thalianaauxinindole-3-acetic acid (IAA)phenylacetic acid (PAA)phenylpropanoid

Identifiers

PMID33959967
PMCPMC8282758
OpenAlexW3159440609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.