Evidence map›Paper›PMID 33958710›Full record

ArticleJournal of human genetics2021

Comprehensive genetic analysis confers high diagnostic yield in 16 Japanese patients with corpus callosum anomalies.

Sachiko Miyamoto, Mitsuhiro Kato, Takuya Hiraide, Tadashi Shiohama, Tomohide Goto, Akira Hojo, Akio Ebata, Manabu Suzuki, Kozue Kobayashi, Pin Fee Chong and 10 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genetics in medicine open · 2024
    Article
  10. Article
  11. Expanding the Phenotypic Spectrum ofMolecular syndromology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 12 institutions in 1 country.

Sachiko MiyamotoDepartment of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan.ORCID http://orcid.org/0000-0003-2124-4795
Mitsuhiro KatoDepartment of Pediatrics, Showa University School of Medicine, Tokyo, Japan.
Takuya HiraideDepartment of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan.ORCID http://orcid.org/0000-0001-8159-3474
Tadashi ShiohamaDepartment of Pediatrics, Graduated School of Medicine, Chiba University, Chiba, Japan.ORCID http://orcid.org/0000-0003-0076-5882
Tomohide GotoDivision of Neurology, Kanagawa Children's Medical Center, Yokohama, Japan.
Akira HojoDepartment of Pediatrics, Showa University School of Medicine, Tokyo, Japan.
Akio EbataDepartment of Pediatrics, Showa University School of Medicine, Tokyo, Japan.
Manabu SuzukiDepartment of Pediatrics, Showa University School of Medicine, Tokyo, Japan.
Kozue KobayashiDepartment of Pediatrics, Showa University School of Medicine, Tokyo, Japan.
Pin Fee ChongDepartment of Pediatric Neurology, Fukuoka Children's Hospital, Fukuoka, Japan.
Ryutaro KiraDepartment of Pediatric Neurology, Fukuoka Children's Hospital, Fukuoka, Japan.
Hiroko Baber MatsushitaDepartment of Pediatrics, Kyoto Kuramaguchi Medical Center, Kyoto, Japan.
Hiroko IkedaDepartment of Pediatrics, National Epilepsy Center, NHO Shizuoka Institute of Epilepsy and Neurological Disorders, Shizuoka, Japan.
Kyoko HoshinoSegawa Memorial Neurological Clinic for Children, Tokyo, Japan.ORCID http://orcid.org/0000-0001-6659-7485
Mayumi MatsufujiDepartment of Pediatrics, Minami Kyushu National Hospital, Aira, Japan.
Nobuko MoriyamaDepartment of Pediatrics, Hitachi, Ltd., Hitachinaka General Hospital, Hitachinaka, Japan.
Masayuki FuruyamaDepartment of Pediatrics, Okitama Public General Hospital, Yamagata, Japan.
Tatsuya YamamotoDepartment of Pediatrics, Hirosaki University School of Medicine, Hirosaki, Japan.
Mitsuko NakashimaDepartment of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan. mnakashi@hama-med.ac.jp.ORCID http://orcid.org/0000-0001-7941-1774
Hirotomo SaitsuDepartment of Biochemistry, Hamamatsu University School of Medicine, Hamamatsu, Japan. hsaitsu@hama-med.ac.jp.ORCID http://orcid.org/0000-0003-0723-0960
Showa University · JPFukuoka Children's Hospital and Medical Center for Infectious Diseases · JPHamamatsu University · JPHamamatsu University School of Medicine · JPChiba University · JPHirosaki University · JPHitachi General Hospital · JPKanagawa Children's Medical Center · JPKyoto Medical Center · JPKyushu Hospital · JPNational Epilepsy Center · JPSegawa Neurological Clinic for Children · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corpus callosum anomalies (CCA) is a common congenital brain anomaly with various etiologies. Although one of the most important etiologies is genetic factors, the genetic background of CCA is heterogenous and diverse types of variants are likely to be causative. In this study, we analyzed 16 Japanese patients with corpus callosum anomalies to delineate clinical features and the genetic background of CCAs. We observed the common phenotypes accompanied by CCAs: intellectual disability (100%), motor developmental delay (93.8%), seizures (60%), and facial dysmorphisms (50%). Brain magnetic resonance imaging showed colpocephaly (enlarged posterior horn of the lateral ventricles, 84.6%) and enlarged supracerebellar cistern (41.7%). Whole exome sequencing revealed genetic alterations in 9 of the 16 patients (56.3%), including 8 de novo alterations (2 copy number variants and variants in ARID1B, CDK8, HIVEP2, and TCF4) and a recessive variant of TBCK. De novo ARID1B variants were identified in three unrelated individuals, suggesting that ARID1B variants are major genetic causes of CCAs. A de novo TCF4 variant and somatic mosaic deletion at 18q21.31-qter encompassing TCF4 suggest an association of TCF4 abnormalities with CCAs. This study, which analyzes CCA patients usung whole exome sequencing, demonstrates that comprehensive genetic analysis would be useful for investigating various causal variants of CCAs.

Indexed as

AdolescentAdultAgenesis of Corpus CallosumBrainBrain DiseasesChildChild, PreschoolCongenital AbnormalitiesCorpus CallosumDNA Copy Number VariationsExome SequencingFemaleHumansIntellectual DisabilityJapanLateral Ventricles

Identifiers

PMID33958710
OpenAlexW3158755813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.