Evidence map›Paper›PMID 33958651›Full record

ArticleScientific reports2021

pH induced conformational alteration in human peroxiredoxin 6 might be responsible for its resistance against lysosomal pH or high temperature.

Rimpy Kaur Chowhan, Sunaina Hotumalani, Hamidur Rahaman, Laishram Rajendrakumar Singh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Rimpy Kaur ChowhanDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India.
Sunaina HotumalaniDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India.
Hamidur RahamanDepartment of Biotechnology, Manipur University, Imphal, 795003, India.
Laishram Rajendrakumar SinghDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, 110007, India. lairksingh@gmail.com.
University of Delhi · INAmbedkar University Delhi · INManipur University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peroxiredoxin 6 (Prdx6), the ubiquitously expressed enzyme belonging to the family of peroxidases, namely, peroxiredoxins, exhibits a unique feature of functional compartmentalization within cells. Whereas, the enzyme localized in cytosol shows glutathione peroxidase activity, its lysosomal counterpart performs calcium independent phospholipase A2 (aiPLA2) activity. Like any true moonlighting protein, these two activities of Prdx6 are mutually exclusive of each other as a function of the pH of the cellular compartments. Differential substrate preference at different pH (i.e. peroxidised phospholipids at neutral pH and reduced phospholipids at acidic pH) is considered to be the reason for this behavior. To gain insight into the pH-induced structural-functional interplay we have systematically evaluated conformational variations, thermodynamic stability of the protein and quaternary state of the conformers at both pH 7.0 and 4.0. Our findings suggest that change in pH allows alterations in native states of Prdx6 at pH 7.0 and 4.0 such that the changes make the protein resistant to thermal denaturation at low pH.

Indexed as

CalciumChromatography, GelCircular DichroismFluorescence Resonance Energy TransferHot TemperatureHumansHydrogen-Ion ConcentrationHydrogen PeroxideLysosomesPeroxiredoxin VIProtein Structure, QuaternaryProtein UnfoldingSpectrometry, FluorescenceStructure-Activity RelationshipThermodynamicsCalciumHydrogen PeroxidePeroxiredoxin VIPRDX6 protein, human

Identifiers

PMID33958651
PMCPMC8102515
OpenAlexW3157668468

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.