Evidence map›Paper›PMID 33957987›Full record

ArticleParasites & vectors2021

Real-time PCR biochip for on-site detection of Coxiella burnetii in ticks.

A-Tai Truong, Bo-Ram Yun, Jiyeon Lim, Subin Min, Mi-Sun Yoo, Soon-Seek Yoon, Young-Min Yun, Jong-Taek Kim, Yun Sang Cho

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Molecular Epidemiology ofAnimals : an open access journal from MDPI · 2025
    Article
  5. First Molecular Typing of Tick-DerivedTransboundary and emerging diseases · 2025
    Article
  6. Article
  7. Distribution and Prevalence ofInfectious disease reports · 2023
    Review
  8. Genotyping ofGenes · 2022
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

A-Tai TruongParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Bo-Ram YunParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Jiyeon LimParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Subin MinParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Mi-Sun YooParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Soon-Seek YoonParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea.
Young-Min YunDepartment of Veterinary Internal Medicine, College of Veterinary Medicine, Jeju National University, Jeju, 63243, Republic of Korea.
Jong-Taek KimCollege of Veterinary Medicine, Gangwon National University, Chuncheon, 24341, Republic of Korea.
Yun Sang ChoParasitic and Honeybee Disease Laboratory, Bacterial and Parasitic Disease Division, Department of Animal & Plant Health Research, Animal and Plant Quarantine Agency, Gimcheon, 39660, Republic of Korea. choys@korea.kr.ORCID http://orcid.org/0000-0003-1346-7067
Animal and Plant Quarantine Agency · KRJeju National University · KRKangwon National University · KRThai Nguyen University · VN

Funding

Animal and Plant Quarantine Agency B-1543081-2020-22-03
6 · The paper itself

Abstract

backgroundQ fever, a zoonosis caused by Coxiella burnetii, has adverse effects on public health. Ticks are vectors of C. burnetii and they contribute to the transmission of the pathogen. A tool for rapid, sensitive, and accurate detection of C. burnetii from ticks is important for the prevention of Q fever.

methodsUltra-rapid real-time PCR (UR-qPCR) as a chip-based real-time PCR system was developed for the detection of C. burnetii from ticks. The UR-qPCR system was established and evaluated for the rapidity, sensitivity, and specificity of C. burnetii detection.

resultsC. burnetii was detected using UR-qPCR from 5644 larval, nymphal, and adult ticks from 408 pools collected from livestock and epidemiologically linked environments in two provinces, Gangwon and Jeju, in Korea. Ticks from three species were identified; Haemaphysalis longicornis accounted for the highest number, present in 333 of 408 pools (81.62%), followed by Haemaphysalis flava in 62 pools (15.19%) and Ixodes nipponensis in 13 pools (3.19%). The rapidity and sensitivity of PCR detection was demonstrated with the sufficient amplification and detection of approximately 56 copies of C. burnetii DNA with only 20 min of PCR amplification. The kappa value for the diagnostic agreement between UR-qPCR and stationary qPCR was in perfect agreement (κ = 1). PCR detection and sequencing indicated that C. burnetii was present in 5 of the 408 pools (1.23%), in which four pools contained H. longicornis and one pool contained H. flava. The infection rates of C. burnetii in the tick pools collected from Gangwon and Jeju Provinces were 1.70% and 0.58%, respectively. Phylogenetic analysis indicated a close relationship between the detected C. burnetii and those originating from goats, humans, and ticks in different countries, such as the USA, France, Germany, and Serbia.

conclusionsThe methods described in this study could be important for the prevention and control of Q fever in the two provinces. The UR-qPCR, with its features of mobility, sensitivity, and rapidity, is helpful for constructing early alert systems in the field for C. burnetii in ticks and could help alleviate the transmission of and economic damage due to Q fever.

Indexed as

AnimalsArthropod VectorsCoxiella burnetiiGenes, BacterialHumansIxodidaeQ FeverReal-Time Polymerase Chain ReactionSensitivity and SpecificityTick-Borne DiseasesAsian longhorned tickHaemaphysalis longicornisQ feverTick-borne diseasesUltra-rapid real-time PCR

Identifiers

PMID33957987
PMCPMC8101159
OpenAlexW3132735740

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.