Evidence map›Paper›PMID 33957041›Full record

ArticleBiomacromolecules2021

Disaccharide Residues are Required for Native Antifreeze Glycoprotein Activity.

Yuling Sun, Giulia Giubertoni, Huib J Bakker, Jie Liu, Manfred Wagner, David Y W Ng, Arthur L Devries, Konrad Meister

Open access · hybridAbstract read
In one paragraph

Article in Biomacromolecules, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Synthetic Antifreeze Glycoproteins with Potent Ice-Binding Activity.Chemistry of materials : a publication of the American Chemical Society · 2024
    Article
  4. The Nanoliter Osmometer: Thermal Hysteresis Measurement.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  5. Functional aggregation of cell-free proteins enables fungal ice nucleation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Yuling SunMax Planck Institute for Polymer Research, 55128 Mainz, Germany.
Giulia GiubertoniNWO Institute AMOLF, 1098 XG Amsterdam, The Netherlands.
Huib J BakkerNWO Institute AMOLF, 1098 XG Amsterdam, The Netherlands.ORCID 0000-0003-1564-5314
Jie LiuMax Planck Institute for Polymer Research, 55128 Mainz, Germany.ORCID 0000-0002-0014-5635
Manfred WagnerMax Planck Institute for Polymer Research, 55128 Mainz, Germany.
David Y W NgMax Planck Institute for Polymer Research, 55128 Mainz, Germany.ORCID 0000-0002-0302-0678
Arthur L DevriesUniversity of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States.
Konrad MeisterMax Planck Institute for Polymer Research, 55128 Mainz, Germany.ORCID 0000-0002-6853-6325
Max Planck Institute for Polymer Research · DEInstitute for Atomic and Molecular Physics · NLUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antifreeze glycoproteins (AFGPs) are able to bind to ice, halt its growth, and are the most potent inhibitors of ice recrystallization known. The structural basis for AFGP's unique properties remains largely elusive. Here we determined the antifreeze activities of AFGP variants that we constructed by chemically modifying the hydroxyl groups of the disaccharide of natural AFGPs. Using nuclear magnetic resonance, two-dimensional infrared spectroscopy, and circular dichroism, the expected modifications were confirmed as well as their effect on AFGPs solution structure. We find that the presence of all the hydroxyls on the disaccharides is a requirement for the native AFGP hysteresis as well as the maximal inhibition of ice recrystallization. The saccharide hydroxyls are apparently as important as the acetyl group on the galactosamine, the α-linkage between the disaccharide and threonine, and the methyl groups on the threonine and alanine. We conclude that the use of hydrogen-bonding through the hydroxyl groups of the disaccharide and hydrophobic interactions through the polypeptide backbone are equally important in promoting the antifreeze activities observed in the native AFGPs. These important criteria should be considered when designing synthetic mimics.

Indexed as

Antifreeze ProteinsDisaccharidesGlycoproteinsHydrogen BondingIceMagnetic Resonance SpectroscopyAntifreeze ProteinsDisaccharidesGlycoproteinsIce

Identifiers

PMID33957041
PMCPMC8207503
OpenAlexW3158010409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.