Evidence map›Paper›PMID 33955667›Full record

ArticleMicrobial biotechnology2021

New insights into hydroxyectoine synthesis and its transcriptional regulation in the broad-salt growing halophilic bacterium Chromohalobacter salexigens.

Montserrat Argandoña, Francine Piubeli, Mercedes Reina-Bueno, Joaquín J Nieto, Carmen Vargas

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Article in Microbial biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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  5. Draft Genomes of HalophilicJournal of genomics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Montserrat ArgandoñaDepartment of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.
Francine PiubeliDepartment of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.
Mercedes Reina-BuenoDepartment of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.
Joaquín J NietoDepartment of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.
Carmen VargasDepartment of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, C/ Profesor García González, 2, Sevilla, 41012, Spain.ORCID 0000-0002-4094-4319
Universidad de Sevilla · ES

Funding

Agencia Estatal de Investigación PID2019-111273RB-I00/AEI/10.13039/501100011033BIO2015-63949-R (MINECO/FEDER, UE)Spanish National Network on Extremophilic Microorganisms RED2018-102734-T
6 · The paper itself

Abstract

Elucidating the mechanisms controlling the synthesis of hydroxyectoine is important to design novel genetic engineering strategies for optimizing the production of this biotechnologically relevant compatible solute. The genome of the halophilic bacterium Chromohalobacter salexigens carries two ectoine hydroxylase genes, namely ectD and ectE, whose encoded proteins share the characteristic consensus motif of ectoine hydroxylases but showed only a 51.9% identity between them. In this work, we have shown that ectE encodes a secondary functional ectoine hydroxylase and that the hydroxyectoine synthesis mediated by this enzyme contributes to C.␣salexigens thermoprotection. The evolutionary pattern of EctD and EctE and related proteins suggests that they may have arisen from duplication of an ancestral gene preceding the directional divergence that gave origin to the orders Oceanospirillales and Alteromonadales. Osmoregulated expression of ectD at exponential phase, as well as the thermoregulated expression of ectD at the stationary phase, seemed to be dependent on the general stress factor RpoS. In contrast, expression of ectE was always RpoS-dependent regardless of the growth phase and osmotic or heat stress conditions tested. The data presented here suggest that the AraC-GlxA-like EctZ transcriptional regulator, whose encoding gene lies upstream of ectD, plays a dual function under exponential growth as both a transcriptional activator of osmoregulated ectD expression and a repressor of ectE transcription, privileging the synthesis of the main ectoine hydroxylase EctD. Inactivation of ectZ resulted in a higher amount of the total ectoines pool at the expenses of a higher accumulation of ectoine, with maintenance of the hydroxyectoine levels. In addition to the transcriptional control, our results suggest a strong post-transcriptional regulation of hydroxyectoine synthesis. Data on the accumulation of ectoine and hydroxyectoine in rpoS and ectZ strains pave the way for using these genetic backgrounds for metabolic engineering for hydroxyectoine production.

Indexed as

ChromohalobacterAmino Acids, DiaminoBacteriaSodium ChlorideAmino Acids, DiaminohydroxyectoineSodium Chloride

Identifiers

PMID33955667
PMCPMC8313267
OpenAlexW3157819871

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.