Evidence map›Paper›PMID 33955130›Full record

ArticleMolecular plant pathology2021

A 20-kb lineage-specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum.

Rebekka Harting, Jessica Starke, Harald Kusch, Stefanie Pöggeler, Isabel Maurus, Rabea Schlüter, Manuel Landesfeind, Ingo Bulla, Minou Nowrousian, Ronnie de Jonge and 11 more

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Genomic insights intoFrontiers in microbiology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Frontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 3 countries.

Rebekka HartingDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Jessica StarkeDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Harald KuschDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Stefanie PöggelerDepartment of Genetics of Eukaryotic Microorganisms, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Isabel MaurusDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Rabea SchlüterImaging Center of the Department of Biology, University of Greifswald, Greifswald, Germany.
Manuel LandesfeindDepartment of Bioinformatics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Ingo BullaInstitute for Mathematics and Computer Science, University of Greifswald, Greifswald, Germany.
Minou NowrousianDepartment of Molecular and Cellular Botany, Ruhr-Universität Bochum, Bochum, Germany.
Ronnie de JongePlant-Microbe Interactions, Department of Biology, Science4Life, Utrecht University, Utrecht, Netherlands.
Gertrud StahlhutDepartment of Genetics of Eukaryotic Microorganisms, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Katharina J HoffInstitute for Mathematics and Computer Science, University of Greifswald, Greifswald, Germany.
Kathrin P AßhauerDepartment of Bioinformatics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Andrea ThürmerDepartment of Genomic and Applied Microbiology, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Mario StankeInstitute for Mathematics and Computer Science, University of Greifswald, Greifswald, Germany.
Rolf DanielDepartment of Genomic and Applied Microbiology, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Burkhard MorgensternDepartment of Bioinformatics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Bart P H J ThommaLaboratory of Phytopathology, Wageningen University, Wageningen, Netherlands.ORCID 0000-0003-4125-4181
James W KronstadMichael Smith Laboratories, Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.
Susanna A Braus-StromeyerDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.
Gerhard H BrausDepartment of Molecular Microbiology and Genetics, Institute of Microbiology and Genetics and Göttingen Center for Molecular Biosciences, University of Göttingen, Göttingen, Germany.ORCID 0000-0002-3117-5626
University of Göttingen · DEUniversität Greifswald · DERuhr University Bochum · DEUniversity of British Columbia · CAUtrecht University · NLWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amphidiploid fungal Verticillium longisporum strains Vl43 and Vl32 colonize the plant host Brassica napus but differ in their ability to cause disease symptoms. These strains represent two V. longisporum lineages derived from different hybridization events of haploid parental Verticillium strains. Vl32 and Vl43 carry same-sex mating-type genes derived from both parental lineages. Vl32 and Vl43 similarly colonize and penetrate plant roots, but asymptomatic Vl32 proliferation in planta is lower than virulent Vl43. The highly conserved Vl43 and Vl32 genomes include less than 1% unique genes, and the karyotypes of 15 or 16 chromosomes display changed genetic synteny due to substantial genomic reshuffling. A 20 kb Vl43 lineage-specific (LS) region apparently originating from the Verticillium dahliae-related ancestor is specific for symptomatic Vl43 and encodes seven genes, including two putative transcription factors. Either partial or complete deletion of this LS region in Vl43 did not reduce virulence but led to induction of even more severe disease symptoms in rapeseed. This suggests that the LS insertion in the genome of symptomatic V. longisporum Vl43 mediates virulence-reducing functions, limits damage on the host plant, and therefore tames Vl43 from being even more virulent.

Indexed as

Plant DiseasesVerticilliumAscomycotaGenomicsVirulencegenome comparisonhybridizationlineage-specific regionpathogenicityVerticillium longisporum

Identifiers

PMID33955130
PMCPMC8295516
OpenAlexW3159680509

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.