Evidence map›Paper›PMID 33953920›Full record

ReviewIUCrJ2021

Structural biology in the time of COVID-19: perspectives on methods and milestones.

Miranda L Lynch, Edward H Snell, Sarah E J Bowman

Abstract readReview
In one paragraph

Review in IUCrJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Structure-based approaches against COVID-19.Journal of the Chinese Medical Association : JCMA · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Moving beyond MARCO.PloS one · 2023
    Article
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Miranda L LynchHauptman-Woodward Medical Research Institute, 700 Ellicott Street, Buffalo, NY 14203, USA.ORCID https://orcid.org/0000-0001-8604-4431
Edward H SnellHauptman-Woodward Medical Research Institute, 700 Ellicott Street, Buffalo, NY 14203, USA.ORCID https://orcid.org/0000-0001-8714-3191
Sarah E J BowmanHauptman-Woodward Medical Research Institute, 700 Ellicott Street, Buffalo, NY 14203, USA.ORCID https://orcid.org/0000-0002-7426-7328

Funding

Community Crystallization Resource for Biological MacromoleculesR24GM124135 · NIGMS · HAUPTMAN-WOODWARD MEDICAL RESEARCH INST · PI SNELL, EDWARD H · 2017 to 2020
$1.7M
NIGMS NIH HHS R24 GM124135
6 · The paper itself

Abstract

The global COVID-19 pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has wreaked unprecedented havoc on global society, in terms of a huge loss of life and burden of morbidity, economic upheaval and social disruption. Yet the sheer magnitude and uniqueness of this event has also spawned a massive mobilization of effort in the scientific community to investigate the virus, to develop therapeutics and vaccines, and to understand the public health impacts. Structural biology has been at the center of these efforts, and so it is advantageous to take an opportunity to reflect on the status of structural science vis-à-vis its role in the fight against COVID-19, to register the unprecedented response and to contemplate the role of structural biology in addressing future outbreak threats. As the one-year anniversary of the World Health Organization declaration that COVID-19 is a pandemic has just passed, over 1000 structures of SARS-CoV-2 biomolecules have been deposited in the Worldwide Protein Data Bank (PDB). It is rare to obtain a snapshot of such intense effort in the structural biology arena and is of special interest as the 50th anniversary of the PDB is celebrated in 2021. It is additionally timely as it overlaps with a period that has been termed the 'resolution revolution' in cryoelectron microscopy (CryoEM). CryoEM has recently become capable of producing biomolecular structures at similar resolutions to those traditionally associated with macromolecular X-ray crystallo-graphy. Examining SARS-CoV-2 protein structures that have been deposited in the PDB since the virus was first identified allows a unique window into the power of structural biology and a snapshot of the advantages of the different techniques available, as well as insight into the complementarity of the structural methods.

Indexed as

COVID-19cryoelectron microscopySARS-CoV-2structural biologyX-ray crystallography

Identifiers

PMID33953920
PMCPMC8086156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.