Evidence map›Paper›PMID 33953650›Full record

ReviewJournal of applied crystallography2021

Upscaling X-ray nanoimaging to macroscopic specimens.

Ming Du, Zichao Wendy Di, Doǧa Gürsoy, R Patrick Xian, Yevgenia Kozorovitskiy, Chris Jacobsen

Abstract readReview
In one paragraph

Review in Journal of applied crystallography, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ming DuAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.
Zichao Wendy DiAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.
Doǧa GürsoyAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.
R Patrick XianDepartment of Neurobiology, Northwestern University, Evanston, IL 60208, USA.
Yevgenia KozorovitskiyDepartment of Neurobiology, Northwestern University, Evanston, IL 60208, USA.
Chris JacobsenAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.ORCID https://orcid.org/0000-0001-8562-0353

Funding

Neurohypophyseal regulation of midbrain dopamine systems.R01MH117111 · NIMH · NORTHWESTERN UNIVERSITY · PI KOZOROVITSKIY, YEVGENIA · 2018 to 2022
$2.0M
Mechanisms of striatal structural and functional plasticity.R01NS107539 · NINDS · NORTHWESTERN UNIVERSITY · PI KOZOROVITSKIY, YEVGENIA · 2018 to 2022
$1.7M
Development of Sub 100 nm Resolution X-ray Nanotomography of Centimeter-Sized TissuesR01MH115265 · NIMH · NORTHWESTERN UNIVERSITY · PI JACOBSEN, CHRIS JOHNSON · 2018 to 2021
$1.5M
NIMH NIH HHS R01 MH115265NIMH NIH HHS R01 MH117111NINDS NIH HHS R01 NS107539
6 · The paper itself

Abstract

Upscaling X-ray nanoimaging to macroscopic specimens has the potential for providing insights across multiple length scales, but its feasibility has long been an open question. By combining the imaging requirements and existing proof-of-principle examples in large-specimen preparation, data acquisition and reconstruction algorithms, the authors provide imaging time estimates for howX-ray nanoimaging can be scaled to macroscopic specimens. To arrive at this estimate, a phase contrast imaging model that includes plural scattering effects is used to calculate the required exposure and corresponding radiation dose. The coherent X-ray flux anticipated from upcoming diffraction-limited light sources is then considered. This imaging time estimation is in particular applied to the case of the connectomes of whole mouse brains. To image the connectome of the whole mouse brain, electron microscopy connectomics might require years, whereas optimized X-ray microscopy connectomics could reduce this to one week. Furthermore, this analysis points to challenges that need to be overcome (such as increased X-ray detector frame rate) and opportunities that advances in artificial-intelligence-based 'smart' scanning might provide. While the technical advances required are daunting, it is shown that X-ray microscopy is indeed potentially applicable to nanoimaging of millimetre- or even centimetre-size specimens.

Indexed as

phase contrast X-ray imagingX-ray microscopy

Identifiers

PMID33953650
PMCPMC8056767

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.