Evidence map›Paper›PMID 33953534›Full record

ArticleCancer informatics2021

Computational Methods for Structure-to-Function Analysis of Diet-Derived Catechins-Mediated Targeting of In Vitro Vasculogenic Mimicry.

Abicumaran Uthamacumaran, Narjara Gonzalez Suarez, Abdoulaye Baniré Diallo, Borhane Annabi

Open access · goldAbstract read
In one paragraph

Article in Cancer informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Abicumaran UthamacumaranConcordia University, Department of Physics, Montreal, QC, Canada.
Narjara Gonzalez SuarezLaboratoire d'Oncologie Moléculaire, Département de Chimie, Université du Québec à Montréal, Montreal, QC, Canada.ORCID https://orcid.org/0000-0003-1430-2264
Abdoulaye Baniré DialloCentre de recherche CERMO-FC, Université du Québec à Montréal, Montreal, QC, Canada.
Borhane AnnabiLaboratoire d'Oncologie Moléculaire, Département de Chimie, Université du Québec à Montréal, Montreal, QC, Canada.
Université du Québec à Montréal · CAConcordia University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVasculogenic mimicry (VM) is an adaptive biological phenomenon wherein cancer cells spontaneously self-organize into 3-dimensional (3D) branching network structures. This emergent behavior is considered central in promoting an invasive, metastatic, and therapy resistance molecular signature to cancer cells. The quantitative analysis of such complex phenotypic systems could require the use of computational approaches including machine learning algorithms originating from complexity science. PROCEDURES:

resultsThese algorithms demonstrated the structure-to-function galloyl moiety impact on VM for each of the gallated catechin tested, and shown applicable in quantifying the drug-mediated structural changes in VM processes.

conclusionsOur study provides evidence of how appropriate 3D VM compression and feature extractors coupled with classification/regression methods could be efficient to study

Indexed as

Computational analysisepithelial-mesenchymal transitiongreen tea catechinsmachine learningovarian cancervasculogenic mimicry

Identifiers

PMID33953534
PMCPMC8042551
OpenAlexW3153740300

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.