Evidence map›Paper›PMID 33951346›Full record

ArticleMolecular genetics & genomic medicine2021

Confirming the contribution and genetic spectrum of de novo mutation in infantile spasms: Evidence from a Chinese cohort.

Liying Liu, Fang Liu, Qiuhong Wang, Hua Xie, Zhengchang Li, Qian Lu, Yangyang Wang, Mengna Zhang, Yu Zhang, Jonathan Picker and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Liying LiuDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.
Fang LiuGraduate School of Peking, Union Medical College, Beijing, China.ORCID 0000-0002-3501-060X
Qiuhong WangDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.
Hua XieDepartment of Medical Genetics, Capital Institute of Pediatrics, Beijing, China.ORCID 0000-0002-0069-3877
Zhengchang LiDepartment of Medical Genetics, Capital Institute of Pediatrics, Beijing, China.
Qian LuDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.
Yangyang WangDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.
Mengna ZhangDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.
Yu ZhangDepartment of Lab Center, Capital Institute of Pediatrics, Beijing, China.
Jonathan PickerDivision of Genetics & Genomics (Department of Medicine) and Department of Child & Adolescent Psychiatry, Boston Children's Hospital, Boston, MA, USA.
Xiaodai CuiDepartment of Lab Center, Capital Institute of Pediatrics, Beijing, China.
Liping ZouDepartment of Pediatrics, The First Medical Center of Chinese, PLA General Hospital, Beijing, China.ORCID 0000-0001-7233-9378
Xiaoli ChenDepartment of Medical Genetics, Capital Institute of Pediatrics, Beijing, China.ORCID 0000-0003-0536-1553
Chinese PLA General Hospital · CNCapital Institute of Pediatrics · CNBoston Children's Hospital · USChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveWe determined the yield, genetic spectrum, and actual origin of de novo mutations (DNMs) for infantile spasms (ISs) in a Chinese cohort. The efficacy of levetiracetam (LEV) for STXBP1-related ISs was explored also.

methodsTargeted sequencing of 153 epilepsy-related candidate genes was applied to 289 Chinese patients with undiagnosed ISs. Trio-based amplicon deep sequencing was used for all DNMs to distinguish somatic/mosaic mutations from germline ones.

resultsTotal of 26 DNMs were identified from 289 recruited Chinese patients with undiagnosed ISs. Among them, 24 DNMs were interpreted as pathogenic mutations based on American College of Medical Genetics and Genomics guidelines, contributing to 8.3% (24/289) of diagnosis yield in the Chinese IS cohort. CDKL5 and STXBP1 are the top genes with recurrent DNMs, accounting for 3.1% (9/289) of yield. Further deep resequencing for the trio members showed that 22.7% (5/22) of DNMs are actually somatic in the proband or a parent. These somatic carriers presented milder seizure attacks than those with true germline DNMs. After treatment with LEV for half a year, three patients with DNM in STXBP1 showed improved clinical symptoms, including seizure-free and normal electroencephalogram, except for a patient with a second DNM in DIAPH3. SIGNIFICANCE: Our study confirmed the contribution and genetic spectrum of DNMs in Chinese IS patients. Somatic mutation account for a quarter of DNMs in IS cases. Treatment with LEV improved the prognosis of STXBP1-related ISs.

Indexed as

Germ-Line MutationMosaicismAdolescentAdultAnticonvulsantsChildChild, PreschoolDrug ResistanceFemaleForminsGene FrequencyHumansInfantLevetiracetamMaleMunc18 ProteinsAnticonvulsantsCDKL5 protein, humanDIAPH3 protein, humanForminsLevetiracetamMunc18 ProteinsProtein Serine-Threonine KinasesSTXBP1 protein, humande novo mutationinfantile spasmslevetiracetamsomatic or mosaicism mutationSTXBP1

Identifiers

PMID33951346
PMCPMC8222834
OpenAlexW3159368249

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.