Evidence map›Paper›PMID 33950564›Full record

ArticleChembiochem : a European journal of chemical biology2021

A Potent, Selective CBX2 Chromodomain Ligand and Its Cellular Activity During Prostate Cancer Neuroendocrine Differentiation.

Sijie Wang, Aktan Alpsoy, Surbhi Sood, Sandra Carolina Ordonez-Rubiano, Alisha Dhiman, Yixing Sun, Guanming Jiao, Casey J Krusemark, Emily C Dykhuizen

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Targeting Key Players of Neuroendocrine Differentiation in Prostate Cancer.International journal of molecular sciences · 2023
    Review
  18. Small-molecule discovery through DNA-encoded libraries.Nature reviews. Drug discovery · 2023
    Review
  19. Article
  20. Chemical tools targeting readers of lysine methylation.Current opinion in chemical biology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sijie WangDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Aktan AlpsoyDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Surbhi SoodDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Sandra Carolina Ordonez-RubianoDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Alisha DhimanDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Yixing SunDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Guanming JiaoDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Casey J KrusemarkDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.
Emily C DykhuizenDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, College of Pharmacy, 201 S. University St., West Lafayette, IN, 47907, USA.ORCID 0000-0003-3072-1469
Purdue University West Lafayette · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI ANDREW D MESECAR · 1985 to 2026
$43.4M
Harnessing the In Vitro Selection for Activity-based Proteomics and Chemical Probe DevelopmentR35GM128894 · NIGMS · PURDUE UNIVERSITY · PI Casey John Krusemark · 2018 to 2026
$3.2M
The tumor suppressive role of PBRM1, the bromodomain-containing subunit of the PBAF chromatin remodeling complexU01CA207532 · NCI · PURDUE UNIVERSITY · PI DYKHUIZEN, EMILY CARLA · 2017 to 2021
$1.7M
NCI NIH HHS P30 CA023168NCI NIH HHS U01 CA207532NIGMS NIH HHS R35 GM128894
6 · The paper itself

Abstract

Polycomb group (PcG) proteins are epigenetic regulators that facilitate both embryonic development and cancer progression. PcG proteins form Polycomb repressive complexes 1 and 2 (PRC1 and PRC2). PRC2 trimethylates histone H3 lysine 27 (H3K27me3), a histone mark recognized by the N-terminal chromodomain (ChD) of the CBX subunit of canonical PRC1. There are five PcG CBX paralogs in humans. CBX2 in particular is upregulated in a variety of cancers, particularly in advanced prostate cancers. Using CBX2 inhibitors to understand and target CBX2 in prostate cancer is highly desirable; however, high structural similarity among the CBX ChDs has been challenging for developing selective CBX ChD inhibitors. Here, we utilize selections of focused DNA encoded libraries (DELs) for the discovery of a selective CBX2 chromodomain probe, SW2_152F. SW2_152F binds to CBX2 ChD with a K

Indexed as

Amino Acid SequenceAndrogen AntagonistsCarcinoma, NeuroendocrineCell DifferentiationCell Line, TumorCell Membrane PermeabilityGene Expression Regulation, NeoplasticHistonesHumansLigandsMalePolycomb-Group ProteinsPolycomb Repressive Complex 1Prostatic NeoplasmsProtein BindingSmall Molecule LibrariesAndrogen AntagonistsCBX2 protein, humanHistonesLigandsPolycomb-Group ProteinsPolycomb Repressive Complex 1Small Molecule LibrariesCBX2Chromodomain InhibitorDNA-Encoded LibraryNeuroendocrine DifferentiationProstate Cancer

Identifiers

PMID33950564
PMCPMC8358665
OpenAlexW3157846245

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.