Evidence map›Paper›PMID 33950524›Full record

ArticleThe EMBO journal2021

A single-cell RNA expression atlas of normal, preneoplastic and tumorigenic states in the human breast.

Bhupinder Pal, Yunshun Chen, François Vaillant, Bianca D Capaldo, Rachel Joyce, Xiaoyu Song, Vanessa L Bryant, Jocelyn S Penington, Leon Di Stefano, Nina Tubau Ribera and 7 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 333 papers.

0numbers the graph read from it
0cells of the map it votes in
333citing papers in PubMed
30.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

333 citing papers in PubMed, 472 citations in OpenAlex.

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  11. Regulation of PSAT1 and PHGDH by m6A in endocrine-resistant breast cancer cells.Biochimica et biophysica acta. Molecular basis of disease · 2026
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  16. Restoring the CD226 in CD8Cell death & disease · 2026
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273 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Bhupinder Pal *ACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.ORCID 0000-0002-3684-4331
Yunshun Chen *Department of Medical Biology, The University of Melbourne, Parkville, Vic, Australia.ORCID 0000-0003-4911-5653
François Vaillant *ACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.ORCID 0000-0003-3229-3760
Bianca D CapaldoACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.
Rachel JoyceACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.
Xiaoyu SongACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.
Vanessa L BryantDepartment of Medical Biology, The University of Melbourne, Parkville, Vic, Australia.
Jocelyn S PeningtonDepartment of Medical Biology, The University of Melbourne, Parkville, Vic, Australia.
Leon Di StefanoDepartment of Medical Biology, The University of Melbourne, Parkville, Vic, Australia.
Nina Tubau RiberaCentre for Dynamic Imaging, Parkville, Vic, Australia.
Stephen WilcoxAdvanced Technology and Biology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.
Gregory B MannThe Royal Melbourne Hospital, Parkville, Vic, Australia.
kConFabThe Peter MacCallum Cancer Centre, Melbourne, Vic, Australia.
Anthony T PapenfussDepartment of Medical Biology, The University of Melbourne, Parkville, Vic, Australia.
Geoffrey J LindemanACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.ORCID 0000-0001-9386-2416
Gordon K SmythBioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.ORCID 0000-0001-9221-2892
Jane E VisvaderACRF Cancer Biology and Stem Cells Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic, Australia.ORCID 0000-0001-9173-6977
The University of Melbourne · AUThe Royal Melbourne Hospital · AUWalter and Eliza Hall Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To examine global changes in breast heterogeneity across different states, we determined the single-cell transcriptomes of > 340,000 cells encompassing normal breast, preneoplastic BRCA1

Indexed as

Gene Expression Regulation, NeoplasticGenetic HeterogeneitySingle-Cell AnalysisBreast NeoplasmsCarcinogenesisCD8-Positive T-LymphocytesFemaleGene Expression ProfilingHumansMammary Glands, HumanRNA-SeqTumor MicroenvironmentBRCA1 carriersbreast cancerLN metastasismicroenvironmentsingle-cell RNA-seq

Identifiers

PMID33950524
PMCPMC8167363
OpenAlexW3158998710

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.