Evidence map›Paper›PMID 33950393›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

From Tube to Structure: SPA Cryo-EM Workflow Using Apoferritin as an Example.

Christoph A Diebolder, Rebecca S Dillard, Ludovic Renault

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Christoph A DiebolderThe Netherlands Centre for Electron Nanoscopy (NeCEN), Leiden University, Leiden, The Netherlands.
Rebecca S DillardThe Netherlands Centre for Electron Nanoscopy (NeCEN), Leiden University, Leiden, The Netherlands.
Ludovic RenaultThe Netherlands Centre for Electron Nanoscopy (NeCEN), Leiden University, Leiden, The Netherlands. l.renault@biology.leidenuniv.nl.
Leiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this chapter, we present an overview of a standard protocol to achieve structure determination at high resolution by Single Particle Analysis cryogenic Electron Microscopy using apoferritin as a standard sample. The purified apoferritin is applied to a glow-discharged support and then flash frozen in liquid ethane. The prepared grids are loaded into the electron microscope and checked for particle spreading and ice thickness. The microscope alignments are performed and the data collection session is setup for an overnight data collection. The collected movies containing two-dimensional images of the apoferritin sample are then processed to obtain a high-resolution three-dimensional reconstruction.

Indexed as

AnimalsApoferritinsCryoelectron MicroscopyEquidaeFreezingImaging, Three-DimensionalSpecimen HandlingWorkflowApoferritinsCryo-EMCryogenic Electron MicroscopySample PreparationSingle Particle AnalysisStandard ProtocolWorkflow

Identifiers

PMID33950393
OpenAlexW3159621201

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.