Evidence map›Paper›PMID 33950354›Full record

ArticleJournal of molecular neuroscience : MN2021

Whole Genomic DNA Methylation Profiling of CpG Sites in Promoter Regions of Dorsal Root Ganglion in Diabetic Neuropathic Pain Mice.

Wen Chen, Ting Lan, Qingyu Sun, Yurui Zhang, Danmin Shen, Tingting Hu, Jing Liu, Yingzi Chong, Peipei Wang, Qian Li and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular neuroscience : MN, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Pathology of pain and its implications for therapeutic interventions.Signal transduction and targeted therapy · 2024
    Review
  3. The Epigenetics of Neuropathic Pain: A Systematic Update.International journal of molecular sciences · 2023
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Wen ChenDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Ting LanDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Qingyu SunDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Yurui ZhangDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Danmin ShenDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Tingting HuDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Jing LiuDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Yingzi ChongDepartment of Anesthesiology Beijing Tian Tan Hospital, Capital Medical University, 100070, Beijing, China.
Peipei WangDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Qian LiDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China.
Weihua CuiDepartment of Anesthesiology Beijing Tian Tan Hospital, Capital Medical University, 100070, Beijing, China.
Fei YangDepartment of Neurobiology, School of Basic Medical Sciences, Advanced Innovation Center for Human Brain Protection, Capital Medical University, 100069, Beijing, China. feiyang@ccmu.edu.cn.ORCID http://orcid.org/0000-0003-3122-2960
Capital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation and demethylation play an important role in neuropathic pain. In general, DNA methylation of CpG sites in the promoter region impedes gene expression, whereas DNA demethylation contributes to gene expression. Here, we evaluated the methylation status of CpG sites in genomic DNA promoter regions in dorsal root ganglions (DRGs) of diabetic neuropathic pain (DNP) mice. In our research, streptozotocin (STZ) was intraperitoneally injected into mice to construct DNP models. The DNP mice showed higher fasting blood glucose (above 11.1 mmol/L), lower body weight, and mechanical allodynia than control mice. Whole-genome bisulfite sequencing (WGBS) revealed an altered methylation pattern in CpG sites in the DNA promoter regions in DRGs of DNP mice. The results showed 376 promoter regions with hypermethylated CpG sites and 336 promoter regions with hypomethylated CpG sites. In addition, our data indicated that altered DNA methylation occurs primarily on CpG sites in DNA promoter regions. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that differentially methylated CpG sites annotated genes were involved in activities of the nervous and sensory systems. Enrichment analysis indicated that genes in these pathways contributed to diabetes or pain. In conclusion, our study enriched the role of DNA methylation in DNP.

Indexed as

DNA MethylationAnimalsCpG IslandsDiabetic NeuropathiesGanglia, SpinalMiceMice, Inbred C57BLNeuralgiaPromoter Regions, GeneticWhole Genome SequencingCpGDiabetic neuropathic painDNA methylationDorsal root ganglion

Identifiers

PMID33950354
OpenAlexW3157258968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.