Evidence map›Paper›PMID 33950019›Full record

ArticleActa crystallographica. Section D, Structural biology2021

Integrated sample-handling and mounting system for fixed-target serial synchrotron crystallography.

Gabrielle Illava, Richard Jayne, Aaron D Finke, David Closs, Wenjie Zeng, Shawn K Milano, Qingqiu Huang, Irina Kriksunov, Pavel Sidorenko, Frank W Wise and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Room-temperature serial synchrotron crystallography of the human phosphatase PTP1B.Acta crystallographica. Section F, Structural biology communications · 2023
    Article
  13. Article
  14. Evolving Experimental Techniques for Structure-Based Drug Design.The journal of physical chemistry. B · 2022
    Review
  15. Room-temperature serial synchrotron crystallography of Drosophila cryptochrome.Acta crystallographica. Section D, Structural biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Gabrielle IllavaDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-5523-1960
Richard JayneMiTeGen LLC, PO Box 3867, Ithaca, NY 14850, USA.
Aaron D FinkeMacCHESS, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-6842-1122
David ClossMiTeGen LLC, PO Box 3867, Ithaca, NY 14850, USA.
Wenjie ZengDepartment of Molecular Biology and Genetics, Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853, USA.
Shawn K MilanoDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.
Qingqiu HuangMacCHESS, Cornell University, Ithaca, NY 14853, USA.
Irina KriksunovMacCHESS, Cornell University, Ithaca, NY 14853, USA.
Pavel SidorenkoSchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-7161-4267
Frank W WiseSchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-8333-2470
Warren R ZipfelMeinig School of Biomedical Engineering, Cornell University, Ithaca, NY 14853, USA.
Benjamin A ApkerMiTeGen LLC, PO Box 3867, Ithaca, NY 14850, USA.
Robert E ThorneMiTeGen LLC, PO Box 3867, Ithaca, NY 14850, USA.
Cornell University · USMiTeGen (United States) · US

Funding

Training and OutreachP30GM124166 · NIGMS · CORNELL UNIVERSITY · PI RICHARD A. CERIONE · 2019 to 2026
$28.3M
Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
NIGMS NIH HHS P30 GM124166NIGMS NIH HHS P41 GM103485
6 · The paper itself

Abstract

Serial synchrotron crystallography (SSX) is enabling the efficient use of small crystals for structure-function studies of biomolecules and for drug discovery. An integrated SSX system has been developed comprising ultralow background-scatter sample holders suitable for room and cryogenic temperature crystallographic data collection, a sample-loading station and a humid `gloveless' glovebox. The sample holders incorporate thin-film supports with a variety of designs optimized for different crystal-loading challenges. These holders facilitate the dispersion of crystals and the removal of excess liquid, can be cooled at extremely high rates, generate little background scatter, allow data collection over >90° of oscillation without obstruction or the risk of generating saturating Bragg peaks, are compatible with existing infrastructure for high-throughput cryocrystallography and are reusable. The sample-loading station allows sample preparation and loading onto the support film, the application of time-varying suction for optimal removal of excess liquid, crystal repositioning and cryoprotection, and the application of sealing films for room-temperature data collection, all in a controlled-humidity environment. The humid glovebox allows microscope observation of the sample-loading station and crystallization trays while maintaining near-saturating humidities that further minimize the risks of sample dehydration and damage, and maximize working times. This integrated system addresses common problems in obtaining properly dispersed, properly hydrated and isomorphous microcrystals for fixed-orientation and oscillation data collection. Its ease of use, flexibility and optimized performance make it attractive not just for SSX but also for single-crystal and few-crystal data collection. Fundamental concepts that are important in achieving desired crystal distributions on a sample holder via time-varying suction-induced liquid flows are also discussed.

Indexed as

Equipment DesignCrystallography, X-RayProteinsSpecimen HandlingSynchrotronsProteinshigh throughputprotein crystallographysample-delivery systemsample supportserial crystallographyserial synchrotron crystallography

Identifiers

PMID33950019
PMCPMC8098472
OpenAlexW3155494874

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.