Evidence map›Paper›PMID 33947795›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Optofluidic multiplex detection of single SARS-CoV-2 and influenza A antigens using a novel bright fluorescent probe assay.

Alexandra Stambaugh, Joshua W Parks, Matthew A Stott, Gopikrishnan G Meena, Aaron R Hawkins, Holger Schmidt

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alexandra StambaughSchool of Engineering, University of California, Santa Cruz, CA 95064; amstamba@ucsc.edu.ORCID 0000-0003-2631-1520
Joshua W ParksSchool of Engineering, University of California, Santa Cruz, CA 95064.
Matthew A StottElectrical and Computer Engineering Department, Brigham Young University, Provo, UT 84602.
Gopikrishnan G MeenaSchool of Engineering, University of California, Santa Cruz, CA 95064.
Aaron R HawkinsElectrical and Computer Engineering Department, Brigham Young University, Provo, UT 84602.
Holger SchmidtSchool of Engineering, University of California, Santa Cruz, CA 95064.
University of California, Santa Cruz · USBrigham Young University · US

Funding

Multiplexed, Non-Amplified, Nucleic Acid-Based Identification of Multidrug Resistant Pathogens Using an Integrated Optofluidic PlatformR01AI116989 · NIAID · BRIGHAM YOUNG UNIVERSITY · PI HAWKINS, AARON R., PITT, WILLIAM G · 2015 to 2019
$5.4M
Nanopore-based multi-target analysis of Zika virus infectionR01EB028608 · NIBIB · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SCHMIDT, HOLGER · 2019 to 2022
$2.7M
NIAID NIH HHS R01 AI116989NIBIB NIH HHS R01 EB028608NIH HHS 1R01AI116989NIH HHS 1R01EB028608NIH HHS 3R01EB028608-02S1
6 · The paper itself

Abstract

The urgency for the development of a sensitive, specific, and rapid point-of-care diagnostic test has deepened during the ongoing COVID-19 pandemic. Here, we introduce an ultrasensitive chip-based antigen test with single protein biomarker sensitivity for the differentiated detection of both severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and influenza A antigens in nasopharyngeal swab samples at diagnostically relevant concentrations. The single-antigen assay is enabled by synthesizing a brightly fluorescent reporter probe, which is incorporated into a bead-based solid-phase extraction assay centered on an antibody sandwich protocol for the capture of target antigens. After optimization of the probe release for detection using ultraviolet light, the full assay is validated with both SARS-CoV-2 and influenza A antigens from clinical nasopharyngeal swab samples (PCR-negative spiked with target antigens). Spectrally multiplexed detection of both targets is implemented by multispot excitation on a multimode interference waveguide platform, and detection at 30 ng/mL with single-antigen sensitivity is reported.

Indexed as

Antigens, ViralBiosensing TechniquesCOVID-19FluorescenceHumansInfluenza A virusInfluenza, HumanLab-On-A-Chip DevicesLimit of DetectionMicrofluidic Analytical TechniquesMolecular Diagnostic TechniquesNasopharynxPoint-of-Care SystemsSARS-CoV-2Antigens, Viralbiosensingintegrated opticsoptofluidicssingle antigen detection

Identifiers

PMID33947795
PMCPMC8158013
OpenAlexW3159051597

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.