Evidence map›Paper›PMID 33946875›Full record

ArticleViruses2021

Characterization of Extracellular Vesicles Secreted in Lentiviral Producing HEK293SF Cell Cultures.

Aline Do Minh, Alexandra T Star, Jacek Stupak, Kelly M Fulton, Arsalan S Haqqani, Jean-François Gélinas, Jianjun Li, Susan M Twine, Amine A Kamen

Abstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
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  9. Article
  10. Article
  11. Article
  12. Extracellular vesicle storm during the course of Ebola virus infection in primates.Frontiers in cellular and infection microbiology · 2023
    Article
  13. Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Aline Do MinhDepartment of Bioengineering, McGill University, Montreal, QC H3A 0E9, Canada.
Alexandra T StarHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.ORCID 0000-0001-9524-4312
Jacek StupakHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.
Kelly M FultonHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.
Arsalan S HaqqaniHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.
Jean-François GélinasDepartment of Bioengineering, McGill University, Montreal, QC H3A 0E9, Canada.ORCID 0000-0003-3454-5781
Jianjun LiHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.
Susan M TwineHuman Health Therapeutics Research Centre, National Research Council Canada, Ottawa, ON K1N 5A2, Canada.
Amine A KamenDepartment of Bioengineering, McGill University, Montreal, QC H3A 0E9, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lentiviral vectors (LVs) are a powerful tool for gene and cell therapy and human embryonic kidney cells (HEK293) have been extensively used as a platform for production of these vectors. Like most cells and cellular tissues, HEK293 cells release extracellular vesicles (EVs). EVs released by cells share similar size, biophysical characteristics and even a biogenesis pathway with cell-produced enveloped viruses, making it a challenge to efficiently separate EVs from LVs. Thus, EVs co-purified with LVs during downstream processing, are considered "impurities" in the context of gene and cell therapy. A greater understanding of EVs co-purifying with LVs is needed to enable improved downstream processing. To that end, EVs from an inducible lentivirus producing cell line were studied under two conditions: non-induced and induced. EVs were identified in both conditions, with their presence confirmed by transmission electron microscopy and Western blot. EV cargos from each condition were then further characterized by a multi-omic approach. Nineteen proteins were identified by mass spectrometry as potential EV markers to differentiate EVs in LV preparations. Lipid composition of EV preparations before and after LV induction showed similar enrichment in phosphatidylserine. RNA cargos in EVs showed enrichment in transcripts involved in viral processes and binding functions. These findings provide insights on the product profile of lentiviral preparations and could support the development of improved separation strategies aimed at removing co-produced EVs.

Indexed as

Biological TransportCell Culture TechniquesChromatography, LiquidComputational BiologyCulture Media, ConditionedExosomesExtracellular VesiclesGenetic VectorsHEK293 CellsHumansLentivirusLipidomicsMass SpectrometryProteomicsCulture Media, Conditionedenveloped virusesexosomeextracellular vesicleslentiviral vectorslipidomicsproteomicstranscriptomics

Identifiers

PMID33946875
PMCPMC8145507

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.