Evidence map›Paper›PMID 33946713›Full record

ArticlePlants (Basel, Switzerland)2021

Detection of Reproducible Major Effect QTL for Petal Traits in Garden Roses.

Dietmar Schulz, Marcus Linde, Thomas Debener

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dietmar SchulzInstitute of Plant Genetics, Molecular Plant Breeding Section, Leibniz University Hannover, Herrenhäuser Straße 2, 30419 Hannover, Germany.
Marcus LindeInstitute of Plant Genetics, Molecular Plant Breeding Section, Leibniz University Hannover, Herrenhäuser Straße 2, 30419 Hannover, Germany.
Thomas DebenerInstitute of Plant Genetics, Molecular Plant Breeding Section, Leibniz University Hannover, Herrenhäuser Straße 2, 30419 Hannover, Germany.ORCID 0000-0002-2012-2246
Leibniz University Hannover · DE

Funding

Aif GmbH KF2554805MD4
6 · The paper itself

Abstract

The detection of QTL by association genetics depends on the genetic architecture of the trait under study, the size and structure of the investigated population and the availability of phenotypic and marker data of sufficient quality and quantity. In roses, we previously demonstrated that major QTL could already be detected in small association panels. In this study, we analyzed petal number, petal size and fragrance in a small panel of 95 mostly tetraploid garden rose genotypes. After genotyping the panel with the 68 K Axiom WagRhSNP chip we detected major QTL for all three traits. Each trait was significantly influenced by several genomic regions. Some of the QTL span genomic regions that comprise several candidate genes. Selected markers from some of these regions were converted into KASP markers and were validated in independent populations of up to 282 garden rose genotypes. These markers demonstrate the robustness of the detected effects independent of the set of genotypes analyzed. Furthermore, the markers can serve as tools for marker-assisted breeding in garden roses. Over an extended timeframe, they may be used as a starting point for the isolation of the genes underlying the QTL.

Indexed as

association mappingflower QTLfragranceKASPmarker-assisted selectionpetal numberpetal sizeSNP

Identifiers

PMID33946713
PMCPMC8145204
OpenAlexW3157552202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.