Evidence map›Paper›PMID 33946590›Full record

ArticleToxins2021

Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function.

Jessica Matos Kleiz-Ferreira, Nuria Cirauqui, Edson Araujo Trajano, Marcius da Silva Almeida, Russolina Benedeta Zingali

Abstract read
In one paragraph

Article in Toxins, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Pharmacological Screening of Venoms from Five BrazilianInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jessica Matos Kleiz-FerreiraLaboratório de Hemostase e Venenos-Instituto de Bioquímica Médica, Leopoldo de Meis (IBqM) and Instituto Nacional de Ciência e Tecnologia de Biologia Estrutural e Bioimagem (Inbeb)-Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro 21941-902, Brazil.
Nuria CirauquiFaculdade de Farmacia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro 21941-902, Brazil.
Edson Araujo TrajanoLaboratório de Hemostase e Venenos-Instituto de Bioquímica Médica, Leopoldo de Meis (IBqM) and Instituto Nacional de Ciência e Tecnologia de Biologia Estrutural e Bioimagem (Inbeb)-Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro 21941-902, Brazil.
Marcius da Silva AlmeidaProtein Advanced Biochemistry (PAB), Instituto de Bioquímica Médica Leopoldo de Meis (IBqM) and Centro Nacional de Biologia Estrutural e Bioimagem (CENABIO), Universidade Federal do Rio de Janeiro, Rio de Janeiro 21941-902, Brazil.
Russolina Benedeta ZingaliLaboratório de Hemostase e Venenos-Instituto de Bioquímica Médica, Leopoldo de Meis (IBqM) and Instituto Nacional de Ciência e Tecnologia de Biologia Estrutural e Bioimagem (Inbeb)-Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro 21941-902, Brazil.ORCID 0000-0003-3156-6923

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 308179/2015-3 and 426945/2016-6Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro E-26/010.003016/2014 and E-26/ 202.829/2017
6 · The paper itself

Abstract

Studies on 3FTxs around the world are showing the amazing diversity in these proteins both in structure and function. In Brazil, we have not realized the broad variety of their amino acid sequences and probable diversified structures and targets. In this context, this work aims to conduct an in silico systematic study on available 3FTxs found in Micrurus species from Brazil. We elaborated a specific guideline for this toxin family. First, we grouped them according to their structural homologue predicted by HHPred server and further curated manually. For each group, we selected one sequence and constructed a representative structural model. By looking at conserved features and comparing with the information available in the literature for this toxin family, we managed to point to potential biological functions. In parallel, the phylogenetic relationship was estimated for our database by maximum likelihood analyses and a phylogenetic tree was constructed including the homologous 3FTx previously characterized. Our results highlighted an astonishing diversity inside this family of toxins, showing some groups with expected functional similarities to known 3FTxs, and pointing out others with potential novel roles and perhaps structures. Moreover, this classification guideline may be useful to aid future studies on these abundant toxins.

Indexed as

Coral SnakesAmino Acid SequenceAnimalsBrazilComputer SimulationElapid VenomsPhylogenyToxins, BiologicalElapid VenomsToxins, Biologicalclassification guidelineMicrurus venomssequence variabilitystructure-functionthree-finger toxins

Identifiers

PMID33946590
PMCPMC8147190

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.