Evidence map›Paper›PMID 33945454›Full record

ArticleMicrobial genomics2021

Experimental evolution in morbidostat reveals converging genomic trajectories on the path to triclosan resistance.

Semen A Leyn, Jaime E Zlamal, Oleg V Kurnasov, Xiaoqing Li, Marinela Elane, Lourdes Myjak, Mikolaj Godzik, Alban de Crecy, Fernando Garcia-Alcalde, Martin Ebeling and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Semen A LeynSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Jaime E ZlamalSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Oleg V KurnasovSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Xiaoqing LiSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Marinela ElaneSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Lourdes MyjakSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Mikolaj GodzikSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Alban de CrecyEvolugate, Gainesville, FL, USA.
Fernando Garcia-AlcaldeRoche Pharma Research and Early Development, Immunology, Infectious Diseases and Ophthalmology, Roche Innovation Center, Basel, Switzerland.
Martin EbelingRoche Pharma Research and Early Development, Pharmaceutical Sciences, Roche Innovation Center, Basel, Switzerland.
Andrei L OstermanSanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
Sanford Burnham Prebys Medical Discovery Institute · USRoche (Switzerland) · CH

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ELENA B PASQUALE · 1985 to 2026
$107.2M
NCI NIH HHS P30 CA030199
6 · The paper itself

Abstract

Understanding the dynamics and mechanisms of acquired drug resistance across major classes of antibiotics and bacterial pathogens is of critical importance for the optimization of current anti-infective therapies and the development of novel ones. To systematically address this challenge, we developed a workflow combining experimental evolution in a morbidostat continuous culturing device with deep genomic sequencing of population samples collected in time series. This approach was applied to the experimental evolution of six populations of

Indexed as

GenomicsAmino Acid SubstitutionAnti-Bacterial AgentsBacteriaDrug Resistance, BacterialEscherichia coliGenes, BacterialMutationTriclosanWhole Genome SequencingAnti-Bacterial AgentsTriclosanantibiotic resistanceEscherichia coliexperimental evolutionmorbidostattriclosan

Identifiers

PMID33945454
PMCPMC8209735
OpenAlexW3159664036

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.