Evidence map›Paper›PMID 33942205›Full record

ArticleCell stress & chaperones2021

Kinetic and structural parameters governing Fic-mediated adenylylation/AMPylation of the Hsp70 chaperone, BiP/GRP78.

Anwesha Sanyal, Erica A Zbornik, Ben G Watson, Charles Christoffer, Jia Ma, Daisuke Kihara, Seema Mattoo

Open access · greenAbstract read
In one paragraph

Article in Cell stress & chaperones, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. AMPylation: key roles in biological regulation across prokaryotes and eukaryotes.Frontiers in cellular and infection microbiology · 2026
    Review
  2. The functional dynamics of FicD's TPR domain are modulated by the interaction with ATP and BiP.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. LZerD Protein-Protein Docking Webserver Enhanced WithFrontiers in molecular biosciences · 2021
    Review
  11. Article
  12. Review
  13. Article
  14. Decrypting the chaperone code.The Journal of biological chemistry
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anwesha SanyalFrom the Department of Biological Sciences, Purdue University, 915 W. State St., LILY G-227, West Lafayette, IN, 47907, USA.
Erica A ZbornikFrom the Department of Biological Sciences, Purdue University, 915 W. State St., LILY G-227, West Lafayette, IN, 47907, USA.
Ben G WatsonFrom the Department of Biological Sciences, Purdue University, 915 W. State St., LILY G-227, West Lafayette, IN, 47907, USA.
Charles ChristofferDepartment of Computer Science, Purdue University, West Lafayette, IN, 47907, USA.
Jia MaBindley Biosciences Center, Purdue University, West Lafayette, IN, 47907, USA.
Daisuke KiharaFrom the Department of Biological Sciences, Purdue University, 915 W. State St., LILY G-227, West Lafayette, IN, 47907, USA.
Seema MattooFrom the Department of Biological Sciences, Purdue University, 915 W. State St., LILY G-227, West Lafayette, IN, 47907, USA. smattoo@purdue.edu.ORCID 0000-0003-3260-0046
Purdue University West Lafayette · US

Funding

Role of Fic Proteins in Cellular SignalingR01GM100092 · NIGMS · PURDUE UNIVERSITY · PI MATTOO, SEEMA · 2015 to 2019
$1.7M
Structural Modeling of Multifarious Protein ComplexesR01GM123055 · NIGMS · PURDUE UNIVERSITY · PI KIHARA, DAISUKE · 2017 to 2020
$1.2M
Indiana Clinical and Translational Sciences Institute CTSI-106564National Science Foundation DMS1614777National Science Foundation IOS1127027NIGMS NIH HHS R01 GM100092NIGMS NIH HHS R01GM11092NIGMS NIH HHS R01 GM123055Purdue Institute for Inflammation, Immunology and Infectious Disease PI4D-209623Purdue Research Foundation PRF-209104
6 · The paper itself

Abstract

Fic (filamentation induced by cAMP) proteins regulate diverse cell signaling events by post-translationally modifying their protein targets, predominantly by the addition of an AMP (adenosine monophosphate). This modification is called Fic-mediated adenylylation or AMPylation. We previously reported that the human Fic protein, HYPE/FicD, is a novel regulator of the unfolded protein response (UPR) that maintains homeostasis in the endoplasmic reticulum (ER) in response to stress from misfolded proteins. Specifically, HYPE regulates UPR by adenylylating the ER chaperone, BiP/GRP78, which serves as a sentinel for UPR activation. Maintaining ER homeostasis is critical for determining cell fate, thus highlighting the importance of the HYPE-BiP interaction. Here, we study the kinetic and structural parameters that determine the HYPE-BiP interaction. By measuring the binding and kinetic efficiencies of HYPE in its activated (Adenylylation-competent) and wild type (de-AMPylation-competent) forms for BiP in its wild type and ATP-bound conformations, we determine that HYPE displays a nearly identical preference for the wild type and ATP-bound forms of BiP in vitro and preferentially de-AMPylates the wild type form of adenylylated BiP. We also show that AMPylation at BiP's Thr366 versus Thr518 sites differentially affect its ATPase activity, and that HYPE does not adenylylate UPR accessory proteins like J-protein ERdJ6. Using molecular docking models, we explain how HYPE is able to adenylylate Thr366 and Thr518 sites in vitro. While a physiological role for AMPylation at both the Thr366 and Thr518 sites has been reported, our molecular docking model supports Thr518 as the structurally preferred modification site. This is the first such analysis of the HYPE-BiP interaction and offers critical insights into substrate specificity and target recognition.

Indexed as

Adenosine MonophosphateEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPHSP70 Heat-Shock ProteinsHumansMolecular Docking SimulationProtein Processing, Post-TranslationalUnfolded Protein ResponseAdenosine MonophosphateEndoplasmic Reticulum Chaperone BiPHSP70 Heat-Shock ProteinsAdenylylationAMPylationBiP/GRP78ER stressFicD/HYPEHsp70Post-translational modificationUnfolded protein response

Identifiers

PMID33942205
PMCPMC8275707
OpenAlexW3157392493

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.