Evidence map›Paper›PMID 33941775›Full record

ArticleNature communications2021

DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation.

Wendan Ren, Huitao Fan, Sara A Grimm, Jae Jin Kim, Linhui Li, Yiran Guo, Christopher James Petell, Xiao-Feng Tan, Zhi-Min Zhang, John P Coan and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 116 citations in OpenAlex.

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  15. The dynamic centromere.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  16. Article
  17. Epigenetic networks coordinate DNA methylation across the genome.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 7 institutions in 1 country.

Wendan Ren *Department of Biochemistry, University of California, Riverside, CA, USA.
Huitao Fan *Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA.
Sara A GrimmDivision of Intramural Research, Epigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, Durham, NC, USA.ORCID 0000-0003-3050-1909
Jae Jin KimDepartment of Molecular Biosciences, LIVESTRONG Cancer Institute of the Dell Medical School, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.
Linhui LiDepartment of Biochemistry, University of California, Riverside, CA, USA.
Yiran GuoLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA.ORCID 0000-0002-6266-9186
Christopher James PetellLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA.
Xiao-Feng TanDepartment of Biochemistry, University of California, Riverside, CA, USA.
Zhi-Min ZhangDepartment of Biochemistry, University of California, Riverside, CA, USA.ORCID 0000-0002-5088-5869
John P CoanDepartment of Biology, Stanford University, Stanford, CA, USA.
Jiekai YinEnvironmental Toxicology Graduate Program, University of California, Riverside, CA, USA.
Dae In KimDepartment of Molecular Biosciences, LIVESTRONG Cancer Institute of the Dell Medical School, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.
Linfeng GaoEnvironmental Toxicology Graduate Program, University of California, Riverside, CA, USA.ORCID 0000-0001-6194-5145
Ling CaiLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA.
Nelli KhudaverdyanDepartment of Biochemistry, University of California, Riverside, CA, USA.
Burak ÇetinCell, Molecular, and Developmental Biology Graduate Program, University of California, Riverside, Riverside, CA, USA.
Dinshaw J PatelStructural Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-9779-7778
Yinsheng WangEnvironmental Toxicology Graduate Program, University of California, Riverside, CA, USA.
Qiang CuiDepartments of Chemistry, Physics and Biomedical Engineering, Boston University, Boston, MA, USA.
Brian D StrahlLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA.ORCID 0000-0002-4947-6259
Or GozaniDepartment of Biology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1365-4463
Kyle M MillerDepartment of Molecular Biosciences, LIVESTRONG Cancer Institute of the Dell Medical School, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.ORCID 0000-0002-4544-0013
Seán E O'LearyDepartment of Biochemistry, University of California, Riverside, CA, USA.
Paul A WadeDivision of Intramural Research, Epigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, Durham, NC, USA.ORCID 0000-0002-6042-357X
Gang Greg WangLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC, USA. greg_wang@med.unc.edu.ORCID 0000-0002-7210-9940
Jikui SongDepartment of Biochemistry, University of California, Riverside, CA, USA. jikui.song@ucr.edu.ORCID 0000-0002-4958-1032
University of California, Riverside · USUniversity of North Carolina at Chapel Hill · USLivestrong Foundation · USNational Institute of Environmental Health Sciences · USStanford University · USBoston University · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
Eukaryotic Transcriptional RegulationZIAES101965 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WADE, PAUL A · 2009 to 2025
$40.9M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
Leveraging innovative technologies in basic and clinical cancer researchT32CA009302 · NCI · STANFORD UNIVERSITY · PI LAURA D ATTARDI, Aaron M Newman · 1985 to 2026
$19.1M
Chemical Biology of DNA and RNA AlkylationR35ES031707 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Yinsheng Wang · 2020 to 2026
$6.1M
Mechanisms of chromatin and transcriptional regulationR35GM126900 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Brian D Strahl · 2018 to 2026
$5.5M
Mechanistic Insights into Mammalian DNA MethylationR35GM119721 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Jikui Song · 2016 to 2026
$5.3M
Function of Protein Methylation in Chromatin and Signaling RegulationR35GM139569 · NIGMS · STANFORD UNIVERSITY · PI Or P. Gozani · 2021 to 2026
$4.0M
Eukaryotic Transcriptional RegulationZ01ES101965 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WADE, PAUL A · 2005 to 2008
$3.5M
Shaping DNA Damage Response Networks Via Histone H2A VariantsR01CA198279 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI Kyle M Miller · 2016 to 2026
$3.3M
Intramural NIH HHS Z01 ES101965NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA198279NCI NIH HHS R01 CA201268NCI NIH HHS R01 CA211336NCI NIH HHS R01 CA215284NCI NIH HHS T32 CA009156NCI NIH HHS T32 CA009302NIEHS NIH HHS R35 ES031707NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R00 GM111858NIGMS NIH HHS R35 GM119721NIGMS NIH HHS R35 GM126900NIGMS NIH HHS R35 GM139569
6 · The paper itself

Abstract

DNA methylation and trimethylated histone H4 Lysine 20 (H4K20me3) constitute two important heterochromatin-enriched marks that frequently cooperate in silencing repetitive elements of the mammalian genome. However, it remains elusive how these two chromatin modifications crosstalk. Here, we report that DNA methyltransferase 1 (DNMT1) specifically 'recognizes' H4K20me3 via its first bromo-adjacent-homology domain (DNMT1

Indexed as

AnimalsCell LineCrystallography, X-RayDNA (Cytosine-5-)-Methyltransferase 1DNA MethylationGenomeGenomic InstabilityHeterochromatinHistonesLong Interspersed Nucleotide ElementsMiceDNA (Cytosine-5-)-Methyltransferase 1Dnmt1 protein, mouseHeterochromatinHistones

Identifiers

PMID33941775
PMCPMC8093215
OpenAlexW3159459467

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.